RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 PCIF1Q9H4Z3 704 aa18.46■□□□□ 0.55
RXRB-203ENST00000481441 FAM124BQ9H5Z6 455 aaPredicted RBP18.46■□□□□ 0.55
RXRB-203ENST00000481441 SUSD2Q9UGT4 822 aa18.46■□□□□ 0.55
RXRB-203ENST00000481441 R3HCC1Q9Y3T6 440 aaKnown RBP18.46■□□□□ 0.55
RXRB-203ENST00000481441 SMG1Q96Q15 3661 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 URB1O60287 2271 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 CBFA2T3O75081 653 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 GCNT3O95395 438 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 EGFLAMQ63HQ2 1017 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 NUDT18Q6ZVK8 323 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 USP49Q70CQ1 688 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 HS2ST1Q7LGA3 356 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 GLRX5Q86SX6 157 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 SLCO6A1Q86UG4 719 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 BBS7Q8IWZ6 715 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 NOC3LQ8WTT2 800 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 HNRNPLLQ8WVV9 542 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 MRPL45Q9BRJ2 306 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 FGFBP2Q9BYJ0 223 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 CD93Q9NPY3 652 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 SPHK2Q9NRA0 654 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 APOBEC2Q9Y235 224 aaKnown RBP18.45■□□□□ 0.54
RXRB-203ENST00000481441 RAXQ9Y2V3 346 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 PCDHB13Q9Y5F0 798 aa18.45■□□□□ 0.54
RXRB-203ENST00000481441 CELSR3Q9NYQ7 3312 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 BMP15O95972 392 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 TNNC2P02585 160 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 YWHAQP27348 245 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 IFRD2Q12894 506 aaPredicted RBP18.44■□□□□ 0.54
RXRB-203ENST00000481441 TOGARAM2Q6ZUX3 1019 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 RGL4Q8IZJ4 473 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 GPD1LQ8N335 351 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 PDZD8Q8NEN9 1154 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 WBP2Q969T9 261 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 MMS19Q96T76 1030 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 ZNF518BQ9C0D4 1074 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 ELOVL4Q9GZR5 314 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 SCUBE2Q9NQ36 999 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 STK17AQ9UEE5 414 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 PCOLCE2Q9UKZ9 415 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 SH3BP1Q9Y3L3 701 aa18.44■□□□□ 0.54
RXRB-203ENST00000481441 ASXL3Q9C0F0 2248 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 H3BQV1 296 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 ZBTB24O43167 697 aaPredicted RBP18.43■□□□□ 0.54
RXRB-203ENST00000481441 TACC1O75410 805 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 PTPN1P18031 435 aaKnown RBP18.43■□□□□ 0.54
RXRB-203ENST00000481441 GNL1P36915 607 aaPredicted RBP18.43■□□□□ 0.54
RXRB-203ENST00000481441 GRIK2Q13002 908 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 DUOXA2Q1HG44 320 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 ANO4Q32M45 955 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 HECTD3Q5T447 861 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 SNX30Q5VWJ9 437 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 CHPFQ8IZ52 775 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 NUP93Q8N1F7 819 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 OVCA2Q8WZ82 227 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 FBXO32Q969P5 355 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 ERLEC1Q96DZ1 483 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 GABRG3Q99928 467 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 SNX25Q9H3E2 840 aa18.43■□□□□ 0.54
RXRB-203ENST00000481441 HELZ2Q9BYK8 2649 aaKnown RBP18.42■□□□□ 0.54
RXRB-203ENST00000481441 RTN3O95197 1032 aaPredicted RBP18.42■□□□□ 0.54
RXRB-203ENST00000481441 GNSP15586 552 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 MAOBP27338 520 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 ALCAMQ13740 583 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 WDR45BQ5MNZ6 344 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 SYCP2LQ5T4T6 812 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 GRAMD4Q6IC98 578 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 SDE2Q6IQ49 451 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 FOXJ1Q92949 421 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 MRGPRX1Q96LB2 322 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 B3GNT5Q9BYG0 378 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 ZDHHC5Q9C0B5 715 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 SLC6A17Q9H1V8 727 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 DPEP3Q9H4B8 488 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 CCSER2Q9H7U1 834 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
RXRB-203ENST00000481441 KIAA1522Q9P206 1035 aaPredicted RBP18.42■□□□□ 0.54
RXRB-203ENST00000481441 DKK4Q9UBT3 224 aa18.42■□□□□ 0.54
RXRB-203ENST00000481441 CHORDC1Q9UHD1 332 aaPredicted RBP18.42■□□□□ 0.54
RXRB-203ENST00000481441 PRRT4C9JH25 899 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 CLDN5O00501 218 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 KIAA0391O15091 583 aaKnown RBP18.41■□□□□ 0.54
RXRB-203ENST00000481441 NDUFS2O75306 463 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 FAM163BP0C2L3 166 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 GJB2P29033 226 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 TUBP50607 506 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
RXRB-203ENST00000481441 CBWD2Q8IUF1 395 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 OR6B3Q8NGW1 331 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 DNASE2BQ8WZ79 361 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 COL26A1Q96A83 441 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 LRIG1Q96JA1 1093 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 DNAJC17Q9NVM6 304 aaKnown RBP18.41■□□□□ 0.54
RXRB-203ENST00000481441 IL37Q9NZH6 218 aa18.41■□□□□ 0.54
RXRB-203ENST00000481441 RAD54BQ9Y620 910 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms