RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 FSCN3Q9NQT6 498 aa6.05□□□□□ -1.44
UPF3A-207ENST00000481131 FZD1Q9UP38 647 aa6.05□□□□□ -1.44
UPF3A-207ENST00000481131 CEP170Q5SW79 1584 aa6.05□□□□□ -1.44
UPF3A-207ENST00000481131 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 PROM1O43490 865 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 CCNT2O60583 730 aaKnown RBP6.04□□□□□ -1.44
UPF3A-207ENST00000481131 PPFIA4O75335 1185 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 VIPP01282 170 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 ANXA6P08133 673 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 SRGAP2BP0DMP2 458 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 HSD3B1P14060 373 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 KLRK1P26718 216 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 RBL1P28749 1068 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 CCT5P48643 541 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 GRM4Q14833 912 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 TIGD2Q4W5G0 525 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 DBX2Q6ZNG2 339 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 RASGRP3Q8IV61 690 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 LNX2Q8N448 690 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 C11orf44Q8N8P7 122 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 B3GALNT2Q8NCR0 500 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 SCAMP5Q8TAC9 235 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 ATRIPQ8WXE1 791 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 GLG1Q92896 1179 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 LENG9Q96B70 501 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 PLEKHG4BQ96PX9 1271 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 HAPLN3Q96S86 360 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 GPR20Q99678 358 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 SRP68Q9UHB9 627 aaKnown RBP6.04□□□□□ -1.44
UPF3A-207ENST00000481131 SLC27A6Q9Y2P4 619 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 COL15A1P39059 1388 aa6.04□□□□□ -1.44
UPF3A-207ENST00000481131 ADGRA2Q96PE1 1338 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 KIF27Q86VH2 1401 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 J3KTA2 159 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 NPHP1O15259 732 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 ITGA2BP08514 1039 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 EPHA3P29320 983 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 CLCN2P51788 898 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 ALDH18A1P54886 795 aaKnown RBP6.03□□□□□ -1.44
UPF3A-207ENST00000481131 ARL4CP56559 192 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 TIRAPP58753 221 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 ERICH6BQ5W0A0 696 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 CLEC9AQ6UXN8 241 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 SUN3Q8TAQ9 357 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 RILPL2Q969X0 211 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 GRAMD1AQ96CP6 724 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 VN1R3Q9BXE9 311 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 INO80BQ9C086 356 aaPredicted RBP6.03□□□□□ -1.44
UPF3A-207ENST00000481131 PABPC3Q9H361 631 aaKnown RBP6.03□□□□□ -1.44
UPF3A-207ENST00000481131 PRDM8Q9NQV8 689 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 SLC2A4RGQ9NR83 387 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 HELLSQ9NRZ9 838 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 DKK3Q9UBP4 350 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 HERC5Q9UII4 1024 aaKnown RBP6.03□□□□□ -1.44
UPF3A-207ENST00000481131 DRG1Q9Y295 367 aaKnown RBP6.03□□□□□ -1.44
UPF3A-207ENST00000481131 CLASP1Q7Z460 1538 aa6.03□□□□□ -1.44
UPF3A-207ENST00000481131 GRIN2AQ12879 1464 aa6.02□□□□□ -1.44
UPF3A-207ENST00000481131 A1L4Q6 167 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 ZSCAN9O15535 394 aaPredicted RBP6.02□□□□□ -1.45
UPF3A-207ENST00000481131 TAF5LO75529 589 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 ACTL6BO94805 426 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 PEX11BO96011 259 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 EGR2P11161 476 aaPredicted RBP6.02□□□□□ -1.45
UPF3A-207ENST00000481131 ITGAMP11215 1152 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 YY1P25490 414 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 LIPAP38571 399 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 ITIH3Q06033 890 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 RFX8Q6ZV50 586 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 MRGPREQ86SM8 312 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 MOGAT3Q86VF5 341 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 TOR1AIP2Q8NFQ8 470 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 SOCS4Q8WXH5 440 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 FKBP10Q96AY3 582 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 R3HDM4Q96D70 268 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 WDYHV1Q96HA8 205 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 RTKNQ9BST9 563 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 DDX23Q9BUQ8 820 aaKnown RBP6.02□□□□□ -1.45
UPF3A-207ENST00000481131 NRDE2Q9H7Z3 1164 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 TBCCD1Q9NVR7 557 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 KCTD5Q9NXV2 234 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.02□□□□□ -1.45
UPF3A-207ENST00000481131 GTF2A1LQ9UNN4 478 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 FER1L4A9Z1Z3 1794 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 RIMBP3CA6NJZ7 1639 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 RIMBP3BA6NNM3 1639 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 RIMBP3Q9UFD9 1639 aa6.02□□□□□ -1.45
UPF3A-207ENST00000481131 CTTNBP2Q8WZ74 1663 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 FHAD1B1AJZ9 1412 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 PIPSLA2A3N6 862 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 WDR27A2RRH5 827 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 B9A039 149 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 SLC16A3O15427 465 aaKnown RBP6.01□□□□□ -1.45
UPF3A-207ENST00000481131 SNX2O60749 519 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 ADRB1P08588 477 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 NXPH1P58417 271 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 MTAPQ13126 283 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 TBCCQ15814 346 aa6.01□□□□□ -1.45
UPF3A-207ENST00000481131 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms