RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
SIK3-209ENST00000480222 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
SIK3-209ENST00000480222 ALG6Q9Y672 507 aa13.19□□□□□ -0.3
SIK3-209ENST00000480222 A0A0C4DFX4 3053 aa13.19□□□□□ -0.3
SIK3-209ENST00000480222 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 PRRG1O14668 218 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 LTFP02788 710 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
SIK3-209ENST00000480222 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 PDGFRAP16234 1089 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 PRLRP16471 622 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
SIK3-209ENST00000480222 CTNNA2P26232 953 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 CTNNA1P35221 906 aaKnown RBP13.18□□□□□ -0.3
SIK3-209ENST00000480222 PCK1P35558 622 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 PBX2P40425 430 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 MATKP42679 507 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 ALDH1A3P47895 512 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 PSEN1P49768 467 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 CDR1P51861 262 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
SIK3-209ENST00000480222 OGDHQ02218 1023 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 DDR2Q16832 855 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 CCDC149Q6ZUS6 474 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 EMC1Q8N766 993 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 UBL4BQ8N7F7 174 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.3
SIK3-209ENST00000480222 CD101Q93033 1021 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 LRCH3Q96II8 777 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 BTBD6Q96KE9 485 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 TTLL2Q9BWV7 592 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 TLR10Q9BXR5 811 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 NKX2-4Q9H2Z4 354 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 SLC28A3Q9HAS3 691 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 TMEM51Q9NW97 253 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.3
SIK3-209ENST00000480222 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
SIK3-209ENST00000480222 YJEFN3A6XGL0 299 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 E7ENQ6 273 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 CES2O00748 559 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 ENC1O14682 589 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 GRM6O15303 877 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 GRAP2O75791 330 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 RNF8O76064 485 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 SEC24AO95486 1093 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 GLUD1P00367 558 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 CSH1P0DML2 217 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 CSH2P0DML3 217 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 DNAJB1P25685 340 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 YWHAQP27348 245 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 NOS2P35228 1153 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 GPR15P49685 360 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 AMPD2Q01433 879 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 TAF5Q15542 800 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 ITIH5Q86UX2 942 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 RHOT1Q8IXI2 618 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 PDZD8Q8NEN9 1154 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 RXFP2Q8WXD0 754 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 TRMT2BQ96GJ1 504 aaKnown RBP13.17□□□□□ -0.3
SIK3-209ENST00000480222 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
SIK3-209ENST00000480222 ABCC13Q9NSE7 274 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIK3-209ENST00000480222 SAR1BQ9Y6B6 198 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
SIK3-209ENST00000480222 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
SIK3-209ENST00000480222 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 CAPN9O14815 690 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 TGM5O43548 720 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 LRCH4O75427 683 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 KLRC2P26717 231 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
SIK3-209ENST00000480222 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIK3-209ENST00000480222 IFRD2Q12894 506 aaPredicted RBP13.16□□□□□ -0.3
SIK3-209ENST00000480222 CAMK1Q14012 370 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
SIK3-209ENST00000480222 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 SDHAF4Q5VUM1 108 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 DEFB106AQ8N104 65 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 MICAL1Q8TDZ2 1067 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 FBXO32Q969P5 355 aa13.16□□□□□ -0.3
SIK3-209ENST00000480222 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms