RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 LIN9Q5TKA1 542 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 DAB2IPQ5VWQ8 1189 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 PM20D1Q6GTS8 502 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 PPP1R2P3Q6NXS1 205 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 DENND5BQ6ZUT9 1274 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 Q7L0L9 218 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 TMEM150AQ86TG1 271 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 SCML4Q8N228 414 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 SLC35G2Q8TBE7 412 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 ZNF564Q8TBZ8 553 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 PSMG2Q969U7 264 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 ZNF707Q96C28 371 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 TLE6Q9H808 572 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 NMUR1Q9HB89 426 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 CNGB3Q9NQW8 809 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 HCFC1R1Q9NWW0 138 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 CDH22Q9UJ99 828 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 STRIP2Q9ULQ0 834 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 GUCA1BQ9UMX6 200 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 SCML2Q9UQR0 700 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
NUDCD3-208ENST00000480209 A0A1W2PQH9 124 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 C2CD4BA6NLJ0 364 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TBX10O75333 385 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 FBXO21O94952 628 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TCF4P15884 667 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 YWHAQP27348 245 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 ELF1P32519 619 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 SCNN1AP37088 669 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 CCR2P41597 374 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 EPHB3P54753 998 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 HADHBP55084 474 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TAF10Q12962 218 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 PTPROQ16827 1216 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 PPM1LQ5SGD2 360 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 SYPL2Q5VXT5 272 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 ZDHHC17Q8IUH5 632 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 RHOT2Q8IXI1 618 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 C12orf76Q8N812 135 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 LRRC57Q8N9N7 239 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 MSANTD4Q8NCY6 345 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 FBXO32Q969P5 355 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 SLC2A13Q96QE2 648 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 PARVAQ9NVD7 372 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 ANAPC7Q9UJX3 599 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 MAFFQ9ULX9 164 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 MAGED2Q9UNF1 606 aaPredicted RBP9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 SCINQ9Y6U3 715 aa9.4□□□□□ -0.9
NUDCD3-208ENST00000480209 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 SIGLEC16A6NMB1 481 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 TMEM110-MUSTN1A8MSY1 372 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 DPYSL4O14531 572 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 MDM4O15151 490 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 CCP110O43303 1012 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ZSCAN12O43309 604 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 KRT86O43790 486 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 HSF2BPO75031 334 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 RTN3O95197 1032 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 PAPLNO95428 1278 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 C1RP00736 705 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 LTFP02788 710 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ZDHHC11BP0C7U3 371 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 CSH1P0DML2 217 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 CSH2P0DML3 217 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 KRT3P12035 628 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 HOXA9P31269 272 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ALDH1A3P47895 512 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 YWHAGP61981 247 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 NTHL1P78549 312 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 SLC5A9Q2M3M2 681 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 C15orf59Q2T9L4 293 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 SH3PXD2AQ5TCZ1 1133 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 CCDC149Q6ZUS6 474 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 GAREM2Q75VX8 874 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 DNAJB7Q7Z6W7 309 aaPredicted RBP9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 DEFB106AQ8N104 65 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 ARFGAP1Q8N6T3 406 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 EFHBQ8N7U6 833 aa9.39□□□□□ -0.91
NUDCD3-208ENST00000480209 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms