RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CLCN3P51790 818 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 RBP5P82980 135 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 CDK16Q00536 496 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 TMEM132DQ14C87 1099 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 SLC9A4Q6AI14 798 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 NPNTQ6UXI9 565 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 ZC3H18Q86VM9 953 aaKnown RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 TRAPPC12Q8WVT3 735 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 RAB6BQ9NRW1 208 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 MGAMO43451 1857 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 DNAJC25-GNG10A0A024R161 153 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 APOL1O14791 398 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 CNMDO75829 334 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 GJB1P08034 283 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 SNRPAP09012 282 aaKnown RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 SETSIPP0DME0 302 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 PRKCHP24723 683 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 EPHB2P29323 1055 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 YWHAZP63104 245 aaKnown RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 AMHR2Q16671 573 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 OR6B2Q6IFH4 312 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 FAM183BPQ6ZVS7 135 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 CDR2LQ86X02 465 aaPredicted RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 LRRC6Q86X45 466 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 TAB3Q8N5C8 712 aaPredicted RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 PTPRN2Q92932 1015 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 SKA1Q96BD8 255 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 KLF6Q99612 283 aaPredicted RBP25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 NT5C1AQ9BXI3 368 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 PDZD7Q9H5P4 517 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 ERAP1Q9NZ08 941 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 DCTN4Q9UJW0 460 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 TTLL3Q9Y4R7 772 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 LRRC42Q9Y546 428 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 CSADQ9Y600 493 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 IQCF3P0C7M6 154 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 SERPINB4P48594 390 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 SNX16P57768 344 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 NAA25Q14CX7 972 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 UBA3Q8TBC4 463 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 MTBPQ96DY7 904 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 PTCD3Q96EY7 689 aaKnown RBP25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 NUDCD1Q96RS6 583 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 HEY2Q9UBP5 337 aa25.61■■□□□ 1.69
SYNGAP1-206ENST00000479510 A0A0G2JLL6 359 aaPredicted RBP25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 COPEO14579 308 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 DLDP09622 509 aaKnown RBP25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 TPBGLP0DKB5 382 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 PYGBP11216 843 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 NDST1P52848 882 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 CDK18Q07002 472 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 TRNP1Q6NT89 227 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 PRRT2Q7Z6L0 340 aaPredicted RBP25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 NSL1Q96IY1 281 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 FAM111AQ96PZ2 611 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 ZNF670Q9BS34 389 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 BTBD10Q9BSF8 475 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 IQCGQ9H095 443 aaKnown RBP25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 DONSONQ9NYP3 566 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 A0A0G2JND7 137 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 MDM4O15151 490 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 ZBED1O96006 694 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 IL4RP24394 825 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 BCAR1P56945 870 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 SLC10A6Q3KNW5 377 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 MAP1SQ66K74 1059 aaPredicted RBP25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 GADL1Q6ZQY3 521 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 DCLRE1BQ9H816 532 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 KCNK13Q9HB14 408 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 POPDC2Q9HBU9 364 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 TSPAN16Q9UKR8 245 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 ZSWIM8A7E2V4 1837 aa25.6■■□□□ 1.69
SYNGAP1-206ENST00000479510 E5RJQ4 531 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 KCNN4O15554 427 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 PIAS1O75925 651 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 OSBPP22059 807 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 CCNFP41002 786 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 OVGP1Q12889 678 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 CCDC14Q49A88 953 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 C1orf228Q6PIY5 440 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 BZW1Q7L1Q6 419 aaKnown RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 PQLC3Q8N755 202 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 LINC01465Q8N7H1 131 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 RAB3IL1Q8TBN0 382 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 MMADHCQ9H3L0 296 aaPredicted RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 NKX1-2Q9UD57 310 aaPredicted RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 ZC3H7BQ9UGR2 993 aaKnown RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 CYP3A5P20815 502 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 SH3PXD2AQ5TCZ1 1133 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 CDKL3Q8IVW4 592 aaPredicted RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 SRPK1Q96SB4 655 aaKnown RBP25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 TMEM120AQ9BXJ8 343 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 PCDH18Q9HCL0 1135 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 ETNK2Q9NVF9 386 aa25.59■■□□□ 1.69
SYNGAP1-206ENST00000479510 TRIM49D1C9J1S8 452 aa25.58■■□□□ 1.69
SYNGAP1-206ENST00000479510 PFKMP08237 780 aa25.58■■□□□ 1.69
SYNGAP1-206ENST00000479510 NEFHP12036 1026 aa25.58■■□□□ 1.69
SYNGAP1-206ENST00000479510 PRKG1Q13976 671 aa25.58■■□□□ 1.69
SYNGAP1-206ENST00000479510 TTLL4Q14679 1199 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms