RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 CPA6Q8N4T0 437 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 ARL14EPQ8N8R7 260 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 KIAA1524Q8TCG1 905 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PTCD2Q8WV60 388 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 SLC39A7Q92504 469 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 MRPS31Q92665 395 aaKnown RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 EXOC4Q96A65 974 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 MYRFLQ96LU7 910 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PI4K2AQ9BTU6 479 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 NPDC1Q9NQX5 325 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 FAM53CQ9NYF3 392 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 UXTQ9UBK9 157 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 MMP17Q9ULZ9 603 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 MAGED2Q9UNF1 606 aaPredicted RBP7.09□□□□□ -1.27
VCP-205ENST00000479300 ATP6V1DQ9Y5K8 247 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 PLXNB3Q9ULL4 1909 aa7.09□□□□□ -1.27
VCP-205ENST00000479300 TENM4Q6N022 2769 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 FRMD3A2A2Y4 597 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 UPK3BL1B0FP48 263 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 UPK3BL2E5RIL1 263 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TNFRSF10BO14763 440 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 CYP17A1P05093 508 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CSH1P0DML2 217 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CSH2P0DML3 217 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CD59P13987 128 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TNNI1P19237 187 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ITPKAP23677 461 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ACAT1P24752 427 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 ANXA13P27216 316 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ADSSP30520 456 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 AFMP43652 599 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SLC6A11P48066 632 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CYP2J2P51589 502 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CASP5P51878 434 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 AMPD2Q01433 879 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 KCNA1Q09470 495 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TRPC3Q13507 836 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 MAPRE1Q15691 268 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 COL28A1Q2UY09 1125 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CC2D1AQ6P1N0 951 aaPredicted RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 SLC23A3Q6PIS1 610 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 C4orf50Q6ZRC1 276 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 UNC13DQ70J99 1090 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 PDZD3Q86UT5 571 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 OSTM1Q86WC4 334 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SYT12Q8IV01 421 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 NELFCDQ8IXH7 590 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ALLCQ8N6M5 410 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 FSIP1Q8NA03 581 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 IL17RCQ8NAC3 791 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ZSWIM2Q8NEG5 633 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ZNF397Q8NF99 534 aaPredicted RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 GOLGA5Q8TBA6 731 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SPATA18Q8TC71 538 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TSC1Q92574 1164 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ATP2A3Q93084 1043 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TRMT2BQ96GJ1 504 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 HPDLQ96IR7 371 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CAMK1GQ96NX5 476 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 MMS19Q96T76 1030 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 C7orf25Q9BPX7 421 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 ACBD6Q9BR61 282 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 CBWD1Q9BRT8 395 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 STRA6Q9BX79 667 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TRIM9Q9C026 710 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 DNAI2Q9GZS0 605 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SNX25Q9H3E2 840 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 PDE11AQ9HCR9 933 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 TRPC7Q9HCX4 862 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 EXOC1Q9NV70 894 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 KBTBD4Q9NVX7 518 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 GEMIN8Q9NWZ8 242 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 DDX43Q9NXZ2 648 aaKnown RBP7.08□□□□□ -1.28
VCP-205ENST00000479300 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 EHD2Q9NZN4 543 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 PILRBQ9UKJ0 227 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 HCN2Q9UL51 889 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 L1RE1Q9UN81 338 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 SNX9Q9Y5X1 595 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 MAST4O15021 2626 aa7.08□□□□□ -1.28
VCP-205ENST00000479300 A0A087X0B3 334 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 PVALEFA0A1B0GWK0 134 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 EXOC3O60645 756 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 GJB3O75712 270 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 KLF8O95600 359 aaPredicted RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 CKMP06732 381 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 DLATP10515 647 aaKnown RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 TCF3P15923 654 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 KIR2DL1P43626 348 aaPredicted RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 IFNAR2P48551 515 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 USP46P62068 366 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 TNNC1P63316 161 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 KRT85P78386 507 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 SCAPQ12770 1279 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms