RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 FBXO21O94952 628 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 ELF1P32519 619 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 PLD1Q13393 1074 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 LIN9Q5TKA1 542 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 DAB2IPQ5VWQ8 1189 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 POTEHQ6S545 545 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 BNIPLQ7Z465 357 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 SIX6OS1Q8N1H7 587 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 ARFGAP1Q8N6T3 406 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 C12orf76Q8N812 135 aaPredicted RBP13.75□□□□□ -0.21
CHD3-210ENST00000479080 LRRC57Q8N9N7 239 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 MSANTD4Q8NCY6 345 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 IRGQQ8WZA9 623 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 PSMG2Q969U7 264 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 CEP295NLQ96MC4 621 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 NSUN3Q9H649 340 aaKnown RBP13.75□□□□□ -0.21
CHD3-210ENST00000479080 SYNCQ9H7C4 482 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 PARVAQ9NVD7 372 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 ASNSD1Q9NWL6 643 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 HCFC1R1Q9NWW0 138 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 UVRAGQ9P2Y5 699 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 GUCA1BQ9UMX6 200 aa13.75□□□□□ -0.21
CHD3-210ENST00000479080 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 DPYSL4O14531 572 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 ZSCAN12O43309 604 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 MOSPD3O75425 235 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 LTFP02788 710 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 KRT3P12035 628 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 TCF4P15884 667 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
CHD3-210ENST00000479080 YWHAQP27348 245 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 CCR2P41597 374 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 KIF5AQ12840 1032 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 TAF10Q12962 218 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 PTPROQ16827 1216 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 SH3PXD2AQ5TCZ1 1133 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 ZNF697Q5TEC3 545 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 SYPL2Q5VXT5 272 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 NYAP1Q6ZVC0 841 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
CHD3-210ENST00000479080 ZDHHC17Q8IUH5 632 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 RHOT2Q8IXI1 618 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 DEFB106AQ8N104 65 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 TRMT2BQ96GJ1 504 aaKnown RBP13.74□□□□□ -0.21
CHD3-210ENST00000479080 FAM161BQ96MY7 647 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 SELENOOQ9BVL4 669 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 PLEKHA4Q9H4M7 779 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 COMMD8Q9NX08 183 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 CDH22Q9UJ99 828 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 MAGED2Q9UNF1 606 aaPredicted RBP13.74□□□□□ -0.21
CHD3-210ENST00000479080 NAALADL1Q9UQQ1 740 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 SCINQ9Y6U3 715 aa13.74□□□□□ -0.21
CHD3-210ENST00000479080 CCP110O43303 1012 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 F11P03951 625 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 POU2F2P09086 479 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 CSH1P0DML2 217 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 CSH2P0DML3 217 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 HOXA9P31269 272 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 ALDH1A3P47895 512 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 ATXN1P54253 815 aaKnown RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 YWHAGP61981 247 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHD3-210ENST00000479080 NTHL1P78549 312 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 COL19A1Q14993 1142 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 C15orf59Q2T9L4 293 aaPredicted RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 PPM1LQ5SGD2 360 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 BSPRYQ5W0U4 402 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 GAREM2Q75VX8 874 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 Q7L0L9 218 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 ARCQ7LC44 396 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 EDEM1Q92611 657 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 FBXO32Q969P5 355 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 CFAP57Q96MR6 1250 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 DDX23Q9BUQ8 820 aaKnown RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 TSGA10Q9BZW7 698 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 IGFLR1Q9H665 355 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 LMCD1Q9NZU5 365 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 DNMT3BQ9UBC3 853 aaKnown RBP13.73□□□□□ -0.21
CHD3-210ENST00000479080 ANAPC7Q9UJX3 599 aa13.73□□□□□ -0.21
CHD3-210ENST00000479080 MYH10P35580 1976 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 MDM4O15151 490 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 KRT86O43790 486 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 HSF2BPO75031 334 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 TBX10O75333 385 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 PALMO75781 387 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 PROSCO94903 275 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 IGLV3-25P01717 112 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 LRG1P02750 347 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 GLI1P08151 1106 aa13.72□□□□□ -0.21
CHD3-210ENST00000479080 EPHB3P54753 998 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms