RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ADAM17P78536 824 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 MTMR2Q13614 643 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 NFE2Q16621 373 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 CEP55Q53EZ4 464 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 SFT2D3Q587I9 215 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKRD42Q8N9B4 389 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 TDRD1Q9BXT4 1180 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 EDEM3Q9BZQ6 932 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 KCNN3Q9UGI6 736 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 DBR1Q9UK59 544 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 MAFFQ9ULX9 164 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 PCDHGA3Q9Y5H0 932 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ADGRA3Q8IWK6 1321 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ZSCAN5BA6NJL1 495 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 GOLGA8RI6L899 631 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 CLOCKO15516 846 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 CSDE1O75534 798 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ALX3O95076 343 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 KRT18P05783 430 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 AMPD1P23109 780 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ANXA13P27216 316 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 PGM1P36871 562 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 STAT3P40763 770 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 BACE1P56817 501 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 RNASE9P60153 205 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 CENPPQ6IPU0 288 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ICA1LQ8NDH6 482 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 SGCDQ92629 289 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 TSG101Q99816 390 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 IFT122Q9HBG6 1241 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 MOCS1Q9NZB8 636 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 CFL2Q9Y281 166 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
RTFDC1-207ENST00000477573 ARPC4-TTLL3A0A0A6YYG9 625 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 SCO2O43819 266 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 DNAJC6O75061 913 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 MED24O75448 989 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 BRAFP15056 766 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 SPP2Q13103 211 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 STILQ15468 1287 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 CCDC58Q4VC31 144 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 EGFLAMQ63HQ2 1017 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM91A1Q658Y4 838 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKRD13CQ8N6S4 541 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 TRPM4Q8TD43 1214 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 DNAJC19Q96DA6 116 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 RUBCNLQ9H714 662 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 FANCEQ9HB96 536 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 TAS2R1Q9NYW7 299 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 VAV3Q9UKW4 847 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 M0QX08 132 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ENPP3O14638 875 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 DDHD2O94830 711 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 BAG2O95816 211 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ALOX5P09917 674 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 RARBP10826 455 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 JAK1P23458 1154 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 PRDX6P30041 224 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 AQP4P55087 323 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 P2RX3P56373 397 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 GHRHRQ02643 423 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ANO4Q32M45 955 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 DGLUCYQ7Z3D6 616 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 CPXCR1Q8N123 301 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKRD49Q8WVL7 239 aa13.13□□□□□ -0.31
RTFDC1-207ENST00000477573 RASSF5Q8WWW0 418 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms