RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 RAD54BQ9Y620 910 aa10.42□□□□□ -0.74
COL4A5-204ENST00000477429 DOPEY2Q9Y3R5 2298 aa10.42□□□□□ -0.74
COL4A5-204ENST00000477429 PTPRQQ9UMZ3 2332 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 CEP192Q8TEP8 1941 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 WASH3PC4AMC7 463 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 COCHO43405 550 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 GREM1O60565 184 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 OPHN1O60890 802 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 ABL1P00519 1130 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 CST3P01034 146 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 NTRK1P04629 796 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 KRT18P05783 430 aaKnown RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TNFRSF4P43489 277 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 CYP27A1Q02318 531 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 RILPL1Q5EBL4 403 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 EOGTQ5NDL2 527 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 ARL6IP4Q66PJ3 421 aaKnown RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 DENND5BQ6ZUT9 1274 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TOGARAM2Q6ZUX3 1019 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 NAXDQ8IW45 347 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TMEM86AQ8N2M4 240 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 HDDC3Q8N4P3 179 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TRIML1Q8N9V2 468 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 SCAMP5Q8TAC9 235 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 LARP4BQ92615 738 aaKnown RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 EXOC4Q96A65 974 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 HSPA12BQ96MM6 686 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 CCSER2Q9H7U1 834 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 RBAKQ9NYW8 714 aaPredicted RBP10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TRPM5Q9NZQ8 1165 aa10.41□□□□□ -0.74
COL4A5-204ENST00000477429 TBC1D3BA6NDS4 549 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 TBCAO75347 108 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 HOXB2P14652 356 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 WARSP23381 471 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 PCSK1P29120 753 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 HOXD13P35453 343 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 EIF2DP41214 584 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 POU5F1Q01860 360 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 GRIK2Q13002 908 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 ZNF423Q2M1K9 1284 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 SPDYCQ5MJ68 293 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 C10orf76Q5T2E6 689 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 L1TD1Q5T7N2 865 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 CBWD2Q8IUF1 395 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 FSIP1Q8NA03 581 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 NOC3LQ8WTT2 800 aaKnown RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 HPS3Q969F9 1004 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 HPDLQ96IR7 371 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 KCNK16Q96T55 309 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 B3GNT5Q9BYG0 378 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 GZF1Q9H116 711 aaPredicted RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 CHORDC1Q9UHD1 332 aaPredicted RBP10.4□□□□□ -0.74
COL4A5-204ENST00000477429 ITGA11Q9UKX5 1188 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 CDH9Q9ULB4 789 aa10.4□□□□□ -0.74
COL4A5-204ENST00000477429 PTPRBP23467 1997 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 A0A087X0B3 334 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 H0Y626 953 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 HOXC11O43248 304 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 AP5Z1O43299 807 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 PRPF6O94906 941 aaKnown RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 TRIM16O95361 564 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 IRF1P10914 325 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 MBL2P11226 248 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 HOXD12P35452 270 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 UBA7P41226 1012 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 LHX1P48742 406 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 ATXN3P54252 364 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 RBP5P82980 135 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 HSF5Q4G112 596 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 VSTM1Q6UX27 236 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 PAQR9Q6ZVX9 377 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 CEP76Q8TAP6 659 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 MYCBPAPQ8TBZ2 947 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 IPO4Q8TEX9 1081 aaKnown RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 CALML4Q96GE6 196 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 C8orf48Q96LL4 319 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 ZSCAN31Q96LW9 406 aaPredicted RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 CCDC86Q9H6F5 360 aaKnown RBP10.39□□□□□ -0.75
COL4A5-204ENST00000477429 INTS13Q9NVM9 706 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 BTBD3Q9Y2F9 522 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 KNL1Q8NG31 2342 aa10.39□□□□□ -0.75
COL4A5-204ENST00000477429 URB1O60287 2271 aaKnown RBP10.38□□□□□ -0.75
COL4A5-204ENST00000477429 FAM149AA5PLN7 773 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 KCNJ18B7U540 433 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 TBX18O95935 607 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 ADH1CP00326 375 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 CISD3P0C7P0 127 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 ATXN1LP0C7T5 689 aaKnown RBP10.38□□□□□ -0.75
COL4A5-204ENST00000477429 SCP2P22307 547 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 CCR10P46092 362 aa10.38□□□□□ -0.75
COL4A5-204ENST00000477429 CLDN6P56747 220 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms