RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 AMACRQ9UHK6 382 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 NAALADL1Q9UQQ1 740 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 PTPRDP23468 1912 aa15.12■□□□□ 0.01
COL4A6-206ENST00000477085 TARSL2A2RTX5 802 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 OR6C75A6NL08 312 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 EFCAB14O75071 495 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 DAB1O75553 588 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 FBXO21O94952 628 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 GRIK1P39086 918 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 ARPP19P56211 112 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 ELAVL2Q12926 359 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 BTG3Q14201 252 aaPredicted RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 TAZQ16635 292 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 CYP1B1Q16678 543 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 DDR2Q16832 855 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 HADHQ16836 314 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 DCAF6Q58WW2 860 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 C8orf74Q6P047 294 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 WDR93Q6P2C0 686 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 CMTR2Q8IYT2 770 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SLC39A11Q8N1S5 342 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 PNPLA8Q9NP80 782 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 DDX56Q9NY93 547 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 PTPRSQ13332 1948 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 LRRD1A4D1F6 860 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 BHMG1C9JSJ3 638 aaPredicted RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SOAT2O75908 522 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 ENDOD1O94919 500 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 KRT7P08729 469 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 LINC00271P0C7V0 271 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 RPL17P18621 184 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 KDELR1P24390 212 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 CLCN6P51797 869 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 RBM10P98175 930 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SMC1AQ14683 1233 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 CLUL1Q15846 466 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 CA9Q16790 459 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SLC25A52Q3SY17 297 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 GLE1Q53GS7 698 aaKnown RBP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SCYL2Q6P3W7 929 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 C1orf54Q8WWF1 131 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 HSPH1Q92598 858 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 FUBP3Q96I24 572 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL4A6-206ENST00000477085 NPY6RQ99463 290 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 POPDC2Q9HBU9 364 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 SLC27A5Q9Y2P5 690 aa15.11■□□□□ 0.01
COL4A6-206ENST00000477085 hCG_1818297A0A087WSY0 165 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 MTMR11A4FU01 709 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 FGBP02675 491 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 MYBL2P10244 700 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 NOS2P35228 1153 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 PTGIRP43119 386 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 SLC5A3P53794 718 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 FPGSQ05932 587 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 GPR17Q13304 367 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 NFE2Q16621 373 aaPredicted RBP15.1■□□□□ 0.01
COL4A6-206ENST00000477085 ZC3H12AQ5D1E8 599 aaKnown RBP15.1■□□□□ 0.01
COL4A6-206ENST00000477085 SPOUT1Q5T280 376 aaKnown RBP15.1■□□□□ 0.01
COL4A6-206ENST00000477085 ZFYVE27Q5T4F4 411 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 KAZNQ674X7 775 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 ANKS3Q6ZW76 656 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 SCN4BQ8IWT1 228 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 C7orf61Q8IZ16 206 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 COLGALT1Q8NBJ5 622 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 ATG4AQ8WYN0 398 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
COL4A6-206ENST00000477085 FAM118BQ9BPY3 351 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 PLVAPQ9BX97 442 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 GPATCH2LQ9NWQ4 482 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 PCDHB5Q9Y5E4 795 aa15.1■□□□□ 0.01
COL4A6-206ENST00000477085 TTI1O43156 1089 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 PHF2O75151 1096 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 SYN1P17600 705 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 IL4RP24394 825 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 PTPN7P35236 360 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 KCNJ1P48048 391 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 MMRN1Q13201 1228 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 PPIGQ13427 754 aaKnown RBP eCLIP15.09■□□□□ 0.011e-6■■■■□ 25.5
COL4A6-206ENST00000477085 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 SCML4Q8N228 414 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 C12orf50Q8NA57 414 aaPredicted RBP15.09■□□□□ 0.01
COL4A6-206ENST00000477085 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 GPR152Q8TDT2 470 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 RIN2Q8WYP3 895 aaPredicted RBP15.09■□□□□ 0.01
COL4A6-206ENST00000477085 EDEM1Q92611 657 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 MAGOHBQ96A72 148 aaKnown RBP15.09■□□□□ 0.01
COL4A6-206ENST00000477085 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 CLSTN3Q9BQT9 956 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 SLITRK6Q9H5Y7 841 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 LRRC19Q9H756 370 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL4A6-206ENST00000477085 ZNF446Q9NWS9 450 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 STIM2Q9P246 746 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 CDY1Q9Y6F8 540 aa15.09■□□□□ 0.01
COL4A6-206ENST00000477085 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms