RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 RAP1GAPP47736 663 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PEX5P50542 639 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CLCNKBP51801 687 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 FAM193AP78312 1265 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 DR1Q01658 176 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CCNG2Q16589 344 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 TUBB8Q3ZCM7 444 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
RBM39-230ENST00000476806 CFAP58Q5T655 872 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
RBM39-230ENST00000476806 CC2D1AQ6P1N0 951 aaPredicted RBP8.17□□□□□ -1.1
RBM39-230ENST00000476806 ZNF365Q70YC5 407 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 NECAB2Q7Z6G3 386 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PCGF5Q86SE9 256 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CCDC105Q8IYK2 499 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 TMEM199Q8N511 208 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 RNF169Q8NCN4 708 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 SPPL2BQ8TCT7 592 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 KBTBD7Q8WVZ9 684 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 TFAP2BQ92481 460 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CPXM1Q96SM3 734 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PSMB7Q99436 277 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 ZNF670Q9BS34 389 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PHACTR1Q9C0D0 580 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 SDCBP2Q9H190 292 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 POPDC2Q9HBU9 364 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 MED4Q9NPJ6 270 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 METTL5Q9NRN9 209 aaKnown RBP8.17□□□□□ -1.1
RBM39-230ENST00000476806 HSFX1Q9UBD0 423 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 PRKAG2Q9UGJ0 569 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 RAD54BQ9Y620 910 aa8.17□□□□□ -1.1
RBM39-230ENST00000476806 LAMA2P24043 3122 aaKnown RBP8.17□□□□□ -1.1
RBM39-230ENST00000476806 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 C2CD4BA6NLJ0 364 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 E5RJQ4 531 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CAPN9O14815 690 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CEP290O15078 2479 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ZNF185O15231 689 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 NCK2O43639 380 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CLUHO75153 1309 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 TADA2AO75478 443 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 DAB1O75553 588 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 OAZ2O95190 189 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 MYCP01106 439 aaPredicted RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 AMHP03971 560 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CLTBP09497 229 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 RHOXF2BP0C7M4 288 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 TGM2P21980 687 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 NOS2P35228 1153 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ARL4AP40617 200 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 MATKP42679 507 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ALDH7A1P49419 539 aaKnown RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 DNA2P51530 1060 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CDR1P51861 262 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 PDE4CQ08493 712 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 C2orf54Q08AI8 447 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 SLMAPQ14BN4 828 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 TRIP11Q15643 1979 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 WSCD1Q658N2 575 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 DENND1BQ6P3S1 775 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 OLFML1Q6UWY5 402 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 SPATA2LQ8IUW3 424 aaPredicted RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 GSTCDQ8NEC7 633 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ATL2Q8NHH9 583 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 SLC2A14Q8TDB8 520 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 PRUNE2Q8WUY3 3088 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CAVIN3Q969G5 261 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 MAGOHBQ96A72 148 aaKnown RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 KRT12Q99456 494 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 RHOXF2Q9BQY4 288 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 MRPL45Q9BRJ2 306 aaKnown RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 KRTAP4-8Q9BYQ9 185 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 FRMD8Q9BZ67 464 aaPredicted RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 OSBPL8Q9BZF1 889 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 TRPV6Q9H1D0 765 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 C11orf49Q9H6J7 331 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ZWILCHQ9H900 591 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 CSNK1G1Q9HCP0 422 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 ACP6Q9NPH0 428 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 KRT82Q9NSB4 513 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 OLA1Q9NTK5 396 aaKnown RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 RBM12Q9NTZ6 932 aaKnown RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 HAUS2Q9NVX0 235 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.16□□□□□ -1.1
RBM39-230ENST00000476806 ADAM28Q9UKQ2 775 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 USP18Q9UMW8 372 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 PACSIN2Q9UNF0 486 aaPredicted RBP8.16□□□□□ -1.1
RBM39-230ENST00000476806 INPP5FQ9Y2H2 1132 aa8.16□□□□□ -1.1
RBM39-230ENST00000476806 KIAA0100Q14667 2235 aaKnown RBP8.15□□□□□ -1.1
RBM39-230ENST00000476806 LRRD1A4D1F6 860 aa8.15□□□□□ -1.1
RBM39-230ENST00000476806 CASTOR2A6NHX0 329 aa8.15□□□□□ -1.1
RBM39-230ENST00000476806 GOLGA8SH3BPF8 625 aa8.15□□□□□ -1.1
RBM39-230ENST00000476806 MCF2LO15068 1137 aa8.15□□□□□ -1.1
RBM39-230ENST00000476806 NCAM2O15394 837 aa8.15□□□□□ -1.1
RBM39-230ENST00000476806 PQBP1O60828 265 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms