RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 FAM124BQ9H5Z6 455 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-205ENST00000476387 COQ4Q9Y3A0 265 aa17.13■□□□□ 0.33
COL1A1-205ENST00000476387 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-205ENST00000476387 ABL1P00519 1130 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 ADORA2BP29275 332 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 FMO5P49326 533 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 SLC5A3P53794 718 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 YWHAEP62258 255 aaKnown RBP17.12■□□□□ 0.33
COL1A1-205ENST00000476387 SPEM2Q0P670 501 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CETN1Q12798 172 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CEP68Q76N32 757 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 GAB3Q8WWW8 586 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 ACDQ96AP0 544 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 KCNK16Q96T55 309 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 COMMD8Q9NX08 183 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CDV3Q9UKY7 258 aaKnown RBP17.12■□□□□ 0.33
COL1A1-205ENST00000476387 CPQQ9Y646 472 aa17.12■□□□□ 0.33
COL1A1-205ENST00000476387 ATG2BQ96BY7 2078 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 SPAG17Q6Q759 2223 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 FOXD2O60548 495 aaPredicted RBP17.11■□□□□ 0.33
COL1A1-205ENST00000476387 MAP3K7CLP57077 242 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 SYT13Q7L8C5 426 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 TATDN2Q93075 761 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 LOXL4Q96JB6 756 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
COL1A1-205ENST00000476387 ARID3AQ99856 593 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
COL1A1-205ENST00000476387 IL37Q9NZH6 218 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 SPTBN2O15020 2390 aa17.11■□□□□ 0.33
COL1A1-205ENST00000476387 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 TNFRSF10BO14763 440 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 TBXAS1P24557 533 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 HOXC13P31276 330 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 TUBP50607 506 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 CUL2Q13617 745 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 CSRP2Q16527 193 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 FAM160A2Q8N612 972 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 RPLP0P6Q8NHW5 317 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 JAKMIP2Q96AA8 810 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 HEXIM2Q96MH2 286 aaKnown RBP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 SMOQ99835 787 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 CSNK1G1Q9HCP0 422 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 SEMA4GQ9NTN9 838 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL1A1-205ENST00000476387 SDK1Q7Z5N4 2213 aa17.1■□□□□ 0.33
COL1A1-205ENST00000476387 E2F8A0AVK6 867 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 FAM92AA1XBS5 289 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 PMM2O15305 246 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 P4HA2O15460 535 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 CYP17A1P05093 508 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-205ENST00000476387 OPRD1P41143 372 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 ATXN1P54253 815 aaKnown RBP17.09■□□□□ 0.33
COL1A1-205ENST00000476387 LRMPQ12912 555 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 GAB4Q2WGN9 574 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 CLEC20AQ6ZU45 233 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 ADGRG2Q8IZP9 1017 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 MLKLQ8NB16 471 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 ZMIZ2Q8NF64 920 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 SCAMP5Q8TAC9 235 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 TMEM176AQ96HP8 235 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 NT5C1BQ96P26 610 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
COL1A1-205ENST00000476387 SMPD4Q9NXE4 827 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 EBF1Q9UH73 591 aa17.09■□□□□ 0.33
COL1A1-205ENST00000476387 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 AXIN1O15169 862 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 BEST1O76090 585 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 APBB3O95704 486 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 AFPP02771 609 aaKnown RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 ZDHHC11BP0C7U3 371 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 EIF2DP41214 584 aaKnown RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 MARSP56192 900 aaKnown RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 DMC1Q14565 340 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 DHCR24Q15392 516 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 HECTD3Q5T447 861 aa17.08■□□□□ 0.32
COL1A1-205ENST00000476387 PPP1R26Q5T8A7 1209 aaPredicted RBP17.08■□□□□ 0.32
COL1A1-205ENST00000476387 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms