RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CRYBG2Q8N1P7 616 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 FRMD1Q8N878 549 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 ZDHHC4Q9NPG8 344 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 KRT82Q9NSB4 513 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 GMIPQ9P107 970 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 MBD1Q9UIS9 605 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-228ENST00000476267 ACACBO00763 2458 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 ATP8B3O60423 1300 aa13.9□□□□□ -0.19
MRPL55-228ENST00000476267 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-228ENST00000476267 HHLA1C9JL84 531 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 GIPC1O14908 333 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 PHACTR2O75167 634 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 SLFN14P0C7P3 912 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 CCDC130P13994 396 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 KCNA4P22459 653 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 ASPAP45381 313 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 BIRC3Q13489 604 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 EOGTQ5NDL2 527 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-228ENST00000476267 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 CYP2U1Q7Z449 544 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 ACOT1Q86TX2 421 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 ABCA7Q8IZY2 2146 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 RLN3Q8WXF3 142 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-228ENST00000476267 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 SERTAD1Q9UHV2 236 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 EVLQ9UI08 416 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-228ENST00000476267 RCOR1Q9UKL0 485 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 SPEGQ15772 3267 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 PCDH15Q96QU1 1955 aa13.89□□□□□ -0.19
MRPL55-228ENST00000476267 CEP192Q8TEP8 1941 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 PDXKO00764 312 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 KHNYNO15037 678 aaKnown RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TRIM24O15164 1050 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TULP3O75386 442 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 AP1G2O75843 785 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 PDIA4P13667 645 aaKnown RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 PTGER3P43115 390 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 ME1P48163 572 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 IRX4P78413 519 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 ORC1Q13415 861 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 SGSM1Q2NKQ1 1148 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 KMT5BQ4FZB7 885 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 SPDYCQ5MJ68 293 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 HTR3DQ70Z44 454 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 GPRIN1Q7Z2K8 1008 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 UNC93AQ86WB7 457 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 MIB1Q86YT6 1006 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TERB1Q8NA31 727 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 SLC2A14Q8TDB8 520 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TMC2Q8TDI7 906 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TAF4BQ92750 862 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 MED10Q9BTT4 135 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 KLF16Q9BXK1 252 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 POLMQ9NP87 494 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TMEM9BQ9NQ34 198 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 TMEM74BQ9NUR3 256 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 OSER1Q9NX31 292 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 STARD13Q9Y3M8 1113 aa13.88□□□□□ -0.19
MRPL55-228ENST00000476267 CHD8Q9HCK8 2581 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 MAP1BP46821 2468 aaKnown RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 IKBKBO14920 756 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 TLR5O60602 858 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 NR3C1P04150 777 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 RPN1P04843 607 aaKnown RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 DHPSP49366 369 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 NOVA1P51513 510 aaKnown RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 NDST1P52848 882 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 INCA1Q0VD86 236 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 SPOPLQ6IQ16 392 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 CLEC20AQ6ZU45 233 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 SV2AQ7L0J3 742 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 NAT16Q8N8M0 369 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 C12orf29Q8N999 325 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 P2RY11Q96G91 374 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 TMEM121BQ9BXQ6 578 aaPredicted RBP13.87□□□□□ -0.19
MRPL55-228ENST00000476267 MARK1Q9P0L2 795 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 HPSEQ9Y251 543 aa13.87□□□□□ -0.19
MRPL55-228ENST00000476267 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 A0A1W2PQF6 199 aa13.86□□□□□ -0.19
MRPL55-228ENST00000476267 TCRBV21S2A2A0A5A6 115 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms