RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ARSAP15289 507 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 TUBP50607 506 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 YWHAEP62258 255 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 CETN1Q12798 172 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 GRSF1Q12849 480 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 NR1H3Q13133 447 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 PAK1Q13153 545 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 CCINQ13939 588 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 EML3Q32P44 896 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 HECTD3Q5T447 861 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 MAMSTRQ6ZN01 415 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 FILIP1Q7Z7B0 1213 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 SPEM1Q8N4L4 309 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 SCAMP5Q8TAC9 235 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 NELFBQ8WX92 580 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 NACA2Q9H009 215 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 TLR8Q9NR97 1041 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 IL37Q9NZH6 218 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 COQ4Q9Y3A0 265 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 PLXND1Q9Y4D7 1925 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 THADAQ6YHU6 1953 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 OTOL1A6NHN0 477 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 TRDMT1O14717 391 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC30A4O14863 429 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 BEST1O76090 585 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 GNA14O95837 355 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 GJA4P35212 333 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 CXCL12P48061 93 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 FMO5P49326 533 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 NRLP54845 237 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 CUL2Q13617 745 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 TMEM196Q5HYL7 178 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 PPP1R26Q5T8A7 1209 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 SNX30Q5VWJ9 437 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 NETO1Q8TDF5 533 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 WHAMMQ8TF30 809 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 ARID3AQ99856 593 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 P2RY13Q9BPV8 354 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 RNF38Q9H0F5 515 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 SMPD4Q9NXE4 827 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 GMIPQ9P107 970 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 GMEB2Q9UKD1 530 aa12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-206ENST00000475952 ITPR1Q14643 2758 aa12.02□□□□□ -0.48
NUDCD3-206ENST00000475952 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 COCHO43405 550 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 TLR5O60602 858 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 ZDHHC11BP0C7U3 371 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 TDGF1P13385 188 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 DRD1P21728 446 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 BMP6P22004 513 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SLC8A3P57103 927 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SATB1Q01826 763 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SPEM2Q0P670 501 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 Q6ZS52 159 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 CD101Q93033 1021 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 CHFRQ96EP1 664 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 CFAP97Q9P2B7 532 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 CHORDC1Q9UHD1 332 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SH3BP1Q9Y3L3 701 aa12.02□□□□□ -0.49
NUDCD3-206ENST00000475952 SETXQ7Z333 2677 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 PMM2O15305 246 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 P4HA2O15460 535 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 ATG13O75143 517 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 ADH1CP00326 375 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 CCDC192P0DO97 292 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 ACO1P21399 889 aaKnown RBP12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 PSEN1P49768 467 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 RAD23BP54727 409 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 STX17P56962 302 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 ZXDBP98169 803 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 GOLGA8FQ08AF8 430 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 GOLGA8DPQ0D2H9 430 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 LRMPQ12912 555 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 COL9A2Q14055 689 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 GAS6Q14393 721 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 CAMK4Q16566 473 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 FBXO43Q4G163 708 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 FSTL4Q6MZW2 842 aa12.01□□□□□ -0.49
NUDCD3-206ENST00000475952 GPRIN1Q7Z2K8 1008 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms