RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 AP5Z1O43299 807 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 ENGP17813 658 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 MYL6P60660 151 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 CLDN10P78369 228 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 KDSRQ06136 332 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 STK38Q15208 465 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 UNC13DQ70J99 1090 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 RABEPKQ7Z6M1 372 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 FAM35AQ86V20 835 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 TMEFF1Q8IYR6 380 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 ZNF513Q8N8E2 541 aaPredicted RBP18.91■□□□□ 0.62
PCGF3-209ENST00000475288 TERB1Q8NA31 727 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 HMGB4Q8WW32 186 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 TNIP3Q96KP6 325 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 DMAP1Q9NPF5 467 aaPredicted RBP18.91■□□□□ 0.62
PCGF3-209ENST00000475288 SPHK2Q9NRA0 654 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 SH3BP1Q9Y3L3 701 aa18.91■□□□□ 0.62
PCGF3-209ENST00000475288 ASCC3Q8N3C0 2202 aaKnown RBP18.9■□□□□ 0.62
PCGF3-209ENST00000475288 AKAP13Q12802 2813 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 TBC1D3BA6NDS4 549 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 SCAMP3O14828 347 aaKnown RBP18.9■□□□□ 0.62
PCGF3-209ENST00000475288 TULP3O75386 442 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 CYP2J2P51589 502 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 SLC5A3P53794 718 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 IFRD2Q12894 506 aaPredicted RBP18.9■□□□□ 0.62
PCGF3-209ENST00000475288 SEMA3BQ13214 749 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 DUOXA1Q1HG43 343 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 UAP1L1Q3KQV9 507 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 PAQR9Q6ZVX9 377 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 PIP4P1Q86T03 277 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 FRMD1Q8N878 549 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 DEFB124Q8NES8 71 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 KCNK16Q96T55 309 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 SCNM1Q9BWG6 230 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 NXF1Q9UBU9 619 aaKnown RBP18.9■□□□□ 0.62
PCGF3-209ENST00000475288 NEUROG3Q9Y4Z2 214 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 IGF2RP11717 2491 aa18.9■□□□□ 0.62
PCGF3-209ENST00000475288 CLIC2O15247 247 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 SPTLC2O15270 562 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 BBS7Q8IWZ6 715 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 SCAMP5Q8TAC9 235 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 GOLGA5Q8TBA6 731 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 DHX58Q96C10 678 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 SMYD3Q9H7B4 428 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 CAPN10Q9HC96 672 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 CSNK1G1Q9HCP0 422 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 CHORDC1Q9UHD1 332 aaPredicted RBP18.89■□□□□ 0.61
PCGF3-209ENST00000475288 SLC6A14Q9UN76 642 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 PI4KAP42356 2102 aa18.89■□□□□ 0.61
PCGF3-209ENST00000475288 CEP192Q8TEP8 1941 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 PCDH15Q96QU1 1955 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 STX6O43752 255 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 PHACTR2O75167 634 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 ZNF217O75362 1048 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 YEATS4O95619 227 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 SERPINF2P08697 491 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 GABRG2P18507 467 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 ITPKAP23677 461 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 NTSR1P30989 418 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 HTR3DQ70Z44 454 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 ARMCX6Q7L4S7 300 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 FUKQ8N0W3 1084 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 PGBD3Q8N328 593 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 FBXO44Q9H4M3 255 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 CD248Q9HCU0 757 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 RALYQ9UKM9 306 aaKnown RBP18.88■□□□□ 0.61
PCGF3-209ENST00000475288 HCN2Q9UL51 889 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
PCGF3-209ENST00000475288 DMXL2Q8TDJ6 3036 aa18.88■□□□□ 0.61
PCGF3-209ENST00000475288 MYO18AQ92614 2054 aaKnown RBP18.88■□□□□ 0.61
PCGF3-209ENST00000475288 PVALEFA0A1B0GWK0 134 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 A0A1W2PQF6 199 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 H0Y626 953 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 CACNG3O60359 315 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 CUTAO60888 179 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 TRIM16O95361 564 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 TOP3BO95985 862 aaKnown RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 HOXB2P14652 356 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 SPINK2P20155 84 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 MAPK8P45983 427 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 RPL6Q02878 288 aaKnown RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 HNRNPDQ14103 355 aaKnown RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 KNOP1Q1ED39 458 aaKnown RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 ZNF699Q32M78 642 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 C10orf76Q5T2E6 689 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 TMEM25Q86YD3 366 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 NELFCDQ8IXH7 590 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 NAT16Q8N8M0 369 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 PARD3BQ8TEW8 1205 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 ZNF396Q96N95 335 aaPredicted RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 GMIPQ9P107 970 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 CALCOCO1Q9P1Z2 691 aa18.87■□□□□ 0.61
PCGF3-209ENST00000475288 TFIP11Q9UBB9 837 aaKnown RBP18.87■□□□□ 0.61
PCGF3-209ENST00000475288 PCNX2A6NKB5 2137 aa18.86■□□□□ 0.61
PCGF3-209ENST00000475288 FAM221BA6H8Z2 402 aa18.86■□□□□ 0.61
PCGF3-209ENST00000475288 GREM1O60565 184 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms