RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 FAM3CQ92520 227 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 SHC3Q92529 594 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 NMUR1Q9HB89 426 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
ATG4B-216ENST00000475195 CLIC5Q9NZA1 410 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 CPQQ9Y646 472 aa17.35■□□□□ 0.37
ATG4B-216ENST00000475195 BECN2A8MW95 431 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 SPECC1L-ADORA2AF8WAN1 911 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 CYP26A1O43174 497 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 TLR5O60602 858 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 SETSIPP0DME0 302 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 TARSP26639 723 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 ATP5C1P36542 298 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 RPS9P46781 194 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 RPL34P49207 117 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 APBA1Q02410 837 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 TCF15Q12870 199 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 EML3Q32P44 896 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 DDX42Q86XP3 938 aaKnown RBP eCLIP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 DTWD2Q8NBA8 298 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 PRSS33Q8NF86 280 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 UBA3Q8TBC4 463 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 CHFRQ96EP1 664 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 HSD3B7Q9H2F3 369 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 LINC00597Q9H2U6 94 aa17.34■□□□□ 0.37
ATG4B-216ENST00000475195 DUS2Q9NX74 493 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 LIMA1Q9UHB6 759 aaKnown RBP17.34■□□□□ 0.37
ATG4B-216ENST00000475195 A0A1W2PQH9 124 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 NCAM2O15394 837 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 GABBR2O75899 941 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 LETM1O95202 739 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 DCNP07585 359 aaKnown RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 MBL2P11226 248 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 ZNF18P17022 549 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 PTMSP20962 102 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 BRD2P25440 801 aaKnown RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 CTHP32929 405 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 GPD2P43304 727 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 MAGEA9P43362 315 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 KPNA1P52294 538 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 KRT31Q15323 416 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 TRIM68Q6AZZ1 485 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 BHLHA9Q7RTU4 235 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 ZNF606Q8WXB4 792 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 HSFY1Q96LI6 401 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 KLF16Q9BXK1 252 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-216ENST00000475195 EBF3Q9H4W6 596 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 ECT2Q9H8V3 914 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 DNAJC12Q9UKB3 198 aa17.33■□□□□ 0.36
ATG4B-216ENST00000475195 E2F8A0AVK6 867 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 GREM1O60565 184 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 TBX18O95935 607 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 ZBED1O96006 694 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 CHRNB1P11230 501 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 RARGP13631 454 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 ARSAP15289 507 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 RFX1P22670 979 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 SOX9P48436 509 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 TKTL1P51854 596 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 UBXN2BQ14CS0 331 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 KLHDC7AQ5VTJ3 777 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 PMF1Q6P1K2 205 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 TXNDC11Q6PKC3 985 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 HTR3DQ70Z44 454 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 STK32AQ8WU08 396 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
ATG4B-216ENST00000475195 ATP2A3Q93084 1043 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 CNGB3Q9NQW8 809 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 AJAP1Q9UKB5 411 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-216ENST00000475195 WNT6Q9Y6F9 365 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 CACNA1HO95180 2353 aa17.32■□□□□ 0.36
ATG4B-216ENST00000475195 MIA3Q5JRA6 1907 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 FOXN3O00409 490 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 TRDMT1O14717 391 aaKnown RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 SLC9A3R1O14745 358 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 CALCAP01258 141 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 AMPD2Q01433 879 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 APTXQ7Z2E3 356 aaKnown RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 FAM71AQ8IYT1 594 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 TTC8Q8TAM2 541 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 OTUB2Q96DC9 234 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 ULBP1Q9BZM6 244 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 NAT10Q9H0A0 1025 aaKnown RBP17.31■□□□□ 0.36
ATG4B-216ENST00000475195 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 VPS16Q9H269 839 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 LRRC4Q9HBW1 653 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 SMPD4Q9NXE4 827 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 TAB2Q9NYJ8 693 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 CFAP97Q9P2B7 532 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 TBC1D14Q9P2M4 693 aa17.31■□□□□ 0.36
ATG4B-216ENST00000475195 MYO16Q9Y6X6 1858 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms