RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 A0A1W2PQF6 199 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 ZBTB24O43167 697 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-211ENST00000475184 TNNC2P02585 160 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 NDUFV2P19404 249 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 WASP42768 502 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 CACNA2D1P54289 1103 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-211ENST00000475184 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 NAXDQ8IW45 347 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 GPD1LQ8N335 351 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 DNAJC19Q96DA6 116 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 ZFRQ96KR1 1074 aaKnown RBP16.91■□□□□ 0.3
ITGB1-211ENST00000475184 ELOVL4Q9GZR5 314 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 FAM124BQ9H5Z6 455 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-211ENST00000475184 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 HCN2Q9UL51 889 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
ITGB1-211ENST00000475184 COCHO43405 550 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 YWHAQP27348 245 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 ALCAMQ13740 583 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 DUOXA2Q1HG44 320 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 ANO4Q32M45 955 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 USP49Q70CQ1 688 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 BBS7Q8IWZ6 715 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 RGL4Q8IZJ4 473 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 PDZD8Q8NEN9 1154 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 FBXO32Q969P5 355 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 MRPL45Q9BRJ2 306 aaKnown RBP16.9■□□□□ 0.3
ITGB1-211ENST00000475184 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 SH3BP1Q9Y3L3 701 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 STARD13Q9Y3M8 1113 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 NME7Q9Y5B8 376 aa16.9■□□□□ 0.3
ITGB1-211ENST00000475184 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 GNSP15586 552 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 GJB2P29033 226 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 GNL1P36915 607 aaPredicted RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 SYCP2LQ5T4T6 812 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 TMEM25Q86YD3 366 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 CHPFQ8IZ52 775 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 OVCA2Q8WZ82 227 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 ERLEC1Q96DZ1 483 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 ZNF419Q96HQ0 510 aaPredicted RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 ACOX2Q99424 681 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 DUSP9Q99956 384 aaKnown RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 FGFBP2Q9BYJ0 223 aa16.89■□□□□ 0.29
ITGB1-211ENST00000475184 APOBEC2Q9Y235 224 aaKnown RBP16.89■□□□□ 0.29
ITGB1-211ENST00000475184 KIAA0391O15091 583 aaKnown RBP16.88■□□□□ 0.29
ITGB1-211ENST00000475184 TRIM24O15164 1050 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 NDUFS2O75306 463 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 TACC1O75410 805 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 PTPN1P18031 435 aaKnown RBP16.88■□□□□ 0.29
ITGB1-211ENST00000475184 GRIK2Q13002 908 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
ITGB1-211ENST00000475184 SURF1Q15526 300 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 HECTD3Q5T447 861 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 SDE2Q6IQ49 451 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 SV2BQ7L1I2 683 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 CBWD2Q8IUF1 395 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 FOXJ1Q92949 421 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 ZDHHC5Q9C0B5 715 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 DPEP3Q9H4B8 488 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 CD93Q9NPY3 652 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 CCDC39Q9UFE4 941 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 RAXQ9Y2V3 346 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 NUMA1Q14980 2115 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 TMEM131Q92545 1883 aa16.88■□□□□ 0.29
ITGB1-211ENST00000475184 CKAP5Q14008 2032 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 ZNF233A6NK53 670 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 CLDN5O00501 218 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 IDEP14735 1019 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 TUBP50607 506 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 WDR45BQ5MNZ6 344 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 GLRX5Q86SX6 157 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 WDR49Q8IV35 697 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 HNRNPLLQ8WVV9 542 aaKnown RBP16.87■□□□□ 0.29
ITGB1-211ENST00000475184 MRGPRX1Q96LB2 322 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 GABRG3Q99928 467 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 B3GNT5Q9BYG0 378 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 SLC6A17Q9H1V8 727 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 CCSER2Q9H7U1 834 aa16.87■□□□□ 0.29
ITGB1-211ENST00000475184 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
ITGB1-211ENST00000475184 CHORDC1Q9UHD1 332 aaPredicted RBP16.87■□□□□ 0.29
ITGB1-211ENST00000475184 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
ITGB1-211ENST00000475184 CBFA2T3O75081 653 aa16.86■□□□□ 0.29
ITGB1-211ENST00000475184 PRPF6O94906 941 aaKnown RBP16.86■□□□□ 0.29
ITGB1-211ENST00000475184 IRF1P10914 325 aa16.86■□□□□ 0.29
ITGB1-211ENST00000475184 MAOBP27338 520 aa16.86■□□□□ 0.29
ITGB1-211ENST00000475184 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms