RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PAEPP09466 180 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 MAGEA9P43362 315 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 RPS9P46781 194 aaKnown RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 RGS7P49802 495 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 TUBP50607 506 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 TKTL1P51854 596 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 GCNT1Q02742 428 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 BST2Q10589 180 aaKnown RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 MAPK8IP2Q13387 824 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 LRRC32Q14392 662 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 GBP6Q6ZN66 633 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 FAM114A1Q8IWE2 563 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 MAML2Q8IZL2 1156 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 ULBP1Q9BZM6 244 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 CHRDQ9H2X0 955 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 LRRC4Q9HBW1 653 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 FBRSL1Q9HCM7 1045 aaKnown RBP16.85■□□□□ 0.29
ITGB1-210ENST00000474568 R4GN57 208 aa16.85■□□□□ 0.29
ITGB1-210ENST00000474568 ANAPC1Q9H1A4 1944 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 M0QYV0 167 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 PIK3R2O00459 728 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 XPO1O14980 1071 aaKnown RBP16.84■□□□□ 0.29
ITGB1-210ENST00000474568 NFATC1O95644 943 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 SP9P0CG40 484 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 ATP5C1P36542 298 aaKnown RBP16.84■□□□□ 0.29
ITGB1-210ENST00000474568 USP8P40818 1118 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 GALK1P51570 392 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 GAS6Q14393 721 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 MAN2A1Q16706 1144 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 EXOC3L4Q17RC7 722 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 C10orf120Q5SQS8 335 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 FSTL4Q6MZW2 842 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 C1orf228Q6PIY5 440 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 CCDC186Q7Z3E2 898 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITGB1-210ENST00000474568 KIAA1257Q9ULG3 409 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 USP3Q9Y6I4 520 aa16.84■□□□□ 0.29
ITGB1-210ENST00000474568 ZNF638Q14966 1978 aaKnown RBP16.84■□□□□ 0.29
ITGB1-210ENST00000474568 KCNJ18B7U540 433 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 CACNA1HO95180 2353 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 MBD3O95983 291 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 EGFP01133 1207 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 CYP17A1P05093 508 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 RALAP11233 206 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 LCP1P13796 627 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 MRE11P49959 708 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 ZNF132P52740 706 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 MFAP3P55082 362 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 ADIGQ0VDE8 80 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 GRSF1Q12849 480 aaKnown RBP eCLIP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 NR1H3Q13133 447 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 KCNJ12Q14500 433 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 LCLAT1Q6UWP7 414 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 C11orf57Q6ZUT1 292 aaPredicted RBP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 MIB1Q86YT6 1006 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 SECISBP2LQ93073 1101 aaKnown RBP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 P2RY13Q9BPV8 354 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 TUBGCP2Q9BSJ2 902 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 KLF16Q9BXK1 252 aaPredicted RBP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 UBXN6Q9BZV1 441 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 ACP6Q9NPH0 428 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 CYLDQ9NQC7 956 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 RASAL2Q9UJF2 1139 aa16.83■□□□□ 0.28
ITGB1-210ENST00000474568 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
ITGB1-210ENST00000474568 E2F8A0AVK6 867 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 TRDMT1O14717 391 aaKnown RBP16.82■□□□□ 0.28
ITGB1-210ENST00000474568 SLC9A3R1O14745 358 aaPredicted RBP16.82■□□□□ 0.28
ITGB1-210ENST00000474568 ZBED1O96006 694 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 HMBSP08397 361 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 SETSIPP0DME0 302 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 PON1P27169 355 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 YWHAGP61981 247 aaKnown RBP eCLIP16.82■□□□□ 0.28
ITGB1-210ENST00000474568 AMPD2Q01433 879 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 SATB1Q01826 763 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 EFEMP1Q12805 493 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 CCINQ13939 588 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 DHCR24Q15392 516 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 CNGA2Q16280 664 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 VWA3BQ502W6 1294 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 TMEM196Q5HYL7 178 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 RAB41Q5JT25 222 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 MIIPQ5JXC2 388 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 CCDC183Q5T5S1 534 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 BBS7Q8IWZ6 715 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 CD101Q93033 1021 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 NDST4Q9H3R1 872 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 C2orf42Q9NWW7 574 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 TAB2Q9NYJ8 693 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 AJAP1Q9UKB5 411 aaPredicted RBP16.82■□□□□ 0.28
ITGB1-210ENST00000474568 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
ITGB1-210ENST00000474568 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms