RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NRIP3Q9NQ35 241 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 NPDC1Q9NQX5 325 aaPredicted RBP3.64□□□□□ -1.83
UBR3-208ENST00000474426 KIF24Q5T7B8 1368 aa3.64□□□□□ -1.83
UBR3-208ENST00000474426 GOLGA8QA0A0J9YX86 632 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 A0A0U1RQK1 487 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SERTM2A0A1B0GWG4 89 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZNF320A2RRD8 509 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GOLGA8OA6NCC3 632 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GOLGA8NF8WBI6 632 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 DNALI1O14645 258 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZSCAN12O43309 604 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CTAG2O75638 210 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 DNAJC8O75937 253 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 FARP2O94887 1054 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 PCDH8O95206 1070 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LTKP29376 864 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 STAT6P42226 847 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 STAT5BP51692 787 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TSPAN5P62079 268 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM189BP81408 668 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 DHCR24Q15392 516 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 EZH2Q15910 746 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 GRIK4Q16099 956 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ANKRD20A8PQ5CZ79 823 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ANKRD20A2Q5SQ80 823 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ANKRD20A3Q5VUR7 823 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 HTR3DQ70Z44 454 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SV2BQ7L1I2 683 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PLA2G4DQ86XP0 818 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 C17orf53Q8N3J3 647 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 SYNPOQ8N3V7 929 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM133AQ8N9E0 248 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SCFD2Q8WU76 684 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LEO1Q8WVC0 666 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 FOXJ1Q92949 421 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 RILPL2Q969X0 211 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CFAP57Q96MR6 1250 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CSRNP1Q96S65 589 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CCM2Q9BSQ5 444 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 MRPL1Q9BYD6 325 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 PARD6GQ9BYG4 376 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 WDR26Q9H7D7 661 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SNTG1Q9NSN8 517 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZFP57Q9NU63 452 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZDHHC18Q9NUE0 388 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 NDUFA13Q9P0J0 144 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 COX16Q9P0S2 106 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM8A1Q9UBU6 413 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CYB5R1Q9UHQ9 305 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZMYM5Q9UJ78 669 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GMEB2Q9UKD1 530 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LRFN2Q9ULH4 789 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 STXBP5LQ9Y2K9 1186 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GPC6Q9Y625 555 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 THOC2Q8NI27 1593 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 ADCY9O60503 1353 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 SASH3O75995 380 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 KLHL18O94889 574 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CST3P01034 146 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 LMNAP02545 664 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 SRGAP2CP0DJJ0 459 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 VCLP18206 1134 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CYP3A5P20815 502 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SYT1P21579 422 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ETV5P41161 510 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PTGIRP43119 386 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CLCNKAP51800 687 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ATP8B2P98198 1209 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PTPN11Q06124 597 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 PPARAQ07869 468 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ZNF177Q13360 481 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 SNAPC2Q13487 334 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CAMK2DQ13557 499 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TRADDQ15628 312 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SLC39A12Q504Y0 691 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CDKL4Q5MAI5 379 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 RINT1Q6NUQ1 792 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CHSY3Q70JA7 882 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ADCK1Q86TW2 530 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SLC51AQ86UW1 340 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 COL23A1Q86Y22 540 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 DNAAF5Q86Y56 855 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GPR156Q8NFN8 814 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 OR14C36Q8NHC7 312 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 ANGPTL6Q8NI99 470 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 C7orf43Q8WVR3 580 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LPGAT1Q92604 370 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM227BQ96M60 508 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SPON2Q9BUD6 331 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 LSG1Q9H089 658 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 CUEDC2Q9H467 287 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 VTA1Q9NP79 307 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SOHLH2Q9NX45 425 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CPNE7Q9UBL6 633 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TMPRSS11EQ9UL52 423 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PIN4Q9Y237 131 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 L3MBTL1Q9Y468 752 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms