RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ANAPC1Q9H1A4 1944 aa11.8□□□□□ -0.52
CKS1B-206ENST00000474215 CACNA1IQ9P0X4 2223 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
CKS1B-206ENST00000474215 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
CKS1B-206ENST00000474215 LILRB5O75023 590 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 ATG13O75143 517 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
CKS1B-206ENST00000474215 TBX18O95935 607 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 EGFP01133 1207 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 ATP5C1P36542 298 aaKnown RBP11.79□□□□□ -0.52
CKS1B-206ENST00000474215 SLC8A3P57103 927 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 DHCR24Q15392 516 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 FBXO43Q4G163 708 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
CKS1B-206ENST00000474215 CCDC186Q7Z3E2 898 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 UBR7Q8N806 425 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 MLKLQ8NB16 471 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 CD101Q93033 1021 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 OTUB2Q96DC9 234 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 NMUR1Q9HB89 426 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 CYLDQ9NQC7 956 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 OSER1Q9NX31 292 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 USP3Q9Y6I4 520 aa11.79□□□□□ -0.52
CKS1B-206ENST00000474215 ZNF638Q14966 1978 aaKnown RBP11.78□□□□□ -0.52
CKS1B-206ENST00000474215 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 K7ESF4 209 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
CKS1B-206ENST00000474215 CYP17A1P05093 508 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 VDRP11473 427 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 CD19P15391 556 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 HOXA6P31267 233 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 PSEN1P49768 467 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 SGO2Q562F6 1265 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 KLHDC10Q6PID8 442 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 RHBDF2Q6PJF5 856 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 PIGZQ86VD9 579 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 PPM1KQ8N3J5 372 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 ZNF276Q8N554 614 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 SUMF1Q8NBK3 374 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 MED15Q96RN5 788 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
CKS1B-206ENST00000474215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
CKS1B-206ENST00000474215 C2orf42Q9NWW7 574 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 HESX1Q9UBX0 185 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 SH3BP1Q9Y3L3 701 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 PATJQ8NI35 1801 aa11.78□□□□□ -0.52
CKS1B-206ENST00000474215 CHURC1-FNTBB4DL54 471 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 RNF40O75150 1001 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 ADH1CP00326 375 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 PAEPP09466 180 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 RARGP13631 454 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 OPRD1P41143 372 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 PLA2G4AP47712 749 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 GCNT1Q02742 428 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 PDE4CQ08493 712 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 GOLGA7BQ2TAP0 167 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 GAB4Q2WGN9 574 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 RAB41Q5JT25 222 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 LY6G5CQ5SRR4 150 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 PKN3Q6P5Z2 889 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 TMEM270Q6UE05 265 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 HTR3DQ70Z44 454 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 RRAGAQ7L523 313 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 ARHGAP18Q8N392 663 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 CCDC26Q8TAB7 109 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.53
CKS1B-206ENST00000474215 WBP2Q969T9 261 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 INTS2Q9H0H0 1204 aaKnown RBP11.77□□□□□ -0.53
CKS1B-206ENST00000474215 EPC1Q9H2F5 836 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 DNMT3LQ9UJW3 386 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 TSPAN16Q9UKR8 245 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.53
CKS1B-206ENST00000474215 MYO15AQ9UKN7 3530 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 RNF225M0QZC1 329 aaPredicted RBP11.76□□□□□ -0.53
CKS1B-206ENST00000474215 TULP2O00295 520 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 O00370 1275 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
CKS1B-206ENST00000474215 GREM1O60565 184 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 ZBED1O96006 694 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 IRF1P10914 325 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 RALAP11233 206 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 ADH5P11766 374 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 SLC6A11P48066 632 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 FNTBP49356 437 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 TKTL1P51854 596 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 BCAT1P54687 386 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 GAD2Q05329 585 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
CKS1B-206ENST00000474215 DMWDQ09019 674 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms