RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 GOLGA8DPQ0D2H9 430 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 CNGA2Q16280 664 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 C10orf120Q5SQS8 335 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 LCLAT1Q6UWP7 414 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 SIX6OS1Q8N1H7 587 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 ARHGAP18Q8N392 663 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TFAP2BQ92481 460 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 SPATA6Q9NWH7 488 aaPredicted RBP14.97□□□□□ -0.01
VAMP4-203ENST00000474047 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 MIA3Q5JRA6 1907 aa14.97□□□□□ -0.01
VAMP4-203ENST00000474047 MYO16Q9Y6X6 1858 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 H0Y858 1186 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 MED7O43513 233 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 OLFM2O95897 454 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 IRF1P10914 325 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 RARGP13631 454 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
VAMP4-203ENST00000474047 MAGEA9P43362 315 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 GJB7Q6PEY0 223 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 C11orf57Q6ZUT1 292 aaPredicted RBP14.96□□□□□ -0.01
VAMP4-203ENST00000474047 RSRC2Q7L4I2 434 aaKnown RBP14.96□□□□□ -0.01
VAMP4-203ENST00000474047 RIN3Q8TB24 985 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 ATOH1Q92858 354 aaPredicted RBP14.96□□□□□ -0.01
VAMP4-203ENST00000474047 ECT2Q9H8V3 914 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 LMAN1LQ9HAT1 526 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 HPS4Q9NQG7 708 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 TAB2Q9NYJ8 693 aa14.96□□□□□ -0.01
VAMP4-203ENST00000474047 COL4A3Q01955 1670 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 PATJQ8NI35 1801 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 SCAMP3O14828 347 aaKnown RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 LETM1O95202 739 aaPredicted RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 NFATC1O95644 943 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 ZBED1O96006 694 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 CALCAP01258 141 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 PTMSP20962 102 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 MYL5Q02045 173 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 APBA1Q02410 837 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 TYRO3Q06418 890 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 LRRC32Q14392 662 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 PON2Q15165 354 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 CDK5RAP1Q96SZ6 601 aaKnown RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 VPS16Q9H269 839 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 LINC00597Q9H2U6 94 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 FANCLQ9NW38 375 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 DNAJC12Q9UKB3 198 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 USP3Q9Y6I4 520 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 HELZP42694 1942 aaKnown RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 TULP2O00295 520 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 THAP12O43422 761 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 TBX18O95935 607 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 LCP1P13796 627 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 PGFP49763 221 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 ADIGQ0VDE8 80 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 ANGPT1Q15389 498 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 EML3Q32P44 896 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 RAB41Q5JT25 222 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 MIIPQ5JXC2 388 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 FKBP15Q5T1M5 1219 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 BTBD8Q5XKL5 378 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 C1orf210Q8IVY1 113 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 SECISBP2LQ93073 1101 aaKnown RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 ULBP1Q9BZM6 244 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 NMUR1Q9HB89 426 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 CYLDQ9NQC7 956 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 LSM7Q9UK45 103 aaKnown RBP14.95□□□□□ -0.02
VAMP4-203ENST00000474047 NUDT5Q9UKK9 219 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 CNTN6Q9UQ52 1028 aa14.95□□□□□ -0.02
VAMP4-203ENST00000474047 F5P12259 2224 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 E2F8A0AVK6 867 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 LAMTOR5O43504 91 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 GNA15P30679 374 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 RPS9P46781 194 aaKnown RBP14.94□□□□□ -0.02
VAMP4-203ENST00000474047 RGS7P49802 495 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 ZNF132P52740 706 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 YWHAGP61981 247 aaKnown RBP eCLIP14.94□□□□□ -0.02
VAMP4-203ENST00000474047 ZXDBP98169 803 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 GRSF1Q12849 480 aaKnown RBP eCLIP14.94□□□□□ -0.02
VAMP4-203ENST00000474047 TCF15Q12870 199 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 DGKKQ5KSL6 1271 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 KIAA1958Q8N8K9 716 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 CLDN23Q96B33 292 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 OSER1Q9NX31 292 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 CLIC5Q9NZA1 410 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 DLGAP2Q9P1A6 1054 aa14.94□□□□□ -0.02
VAMP4-203ENST00000474047 KIF26AQ9ULI4 1882 aaPredicted RBP14.94□□□□□ -0.02
VAMP4-203ENST00000474047 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
VAMP4-203ENST00000474047 GJA4P35212 333 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 PTK2Q05397 1052 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 KRT31Q15323 416 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 CDKAL1Q5VV42 579 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 TXNDC11Q6PKC3 985 aa14.93□□□□□ -0.02
VAMP4-203ENST00000474047 SCD5Q86SK9 330 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms