RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 CFAP221Q4G0U5 840 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 INTS6LQ5JSJ4 861 aaKnown RBP13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 FBXL19Q6PCT2 694 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 SPIRE2Q8WWL2 714 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 IGSF8Q969P0 613 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 ACBD6Q9BR61 282 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 C17orf75Q9HAS0 396 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 DDX19AQ9NUU7 478 aaKnown RBP13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 DDX43Q9NXZ2 648 aaKnown RBP13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 TBC1D14Q9P2M4 693 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 ANKMY1Q9P2S6 941 aa13.57□□□□□ -0.24
PCYT1A-214ENST00000473978 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 E9PMD0 336 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 OGTO15294 1046 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 GRIK1P39086 918 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 TPMTP51580 245 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 UCNP55089 124 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 KYAT1Q16773 422 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 BROXQ5VW32 411 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 LAYNQ6UX15 382 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 TMEM25Q86YD3 366 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 MKRN2Q9H000 416 aaKnown RBP13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 PCDHB6Q9Y5E3 794 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 HCRTO43612 131 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 C1SP09871 688 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 CDK4P11802 303 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 ANO4Q32M45 955 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 FUT11Q495W5 492 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 RINT1Q6NUQ1 792 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 SPATA2LQ8IUW3 424 aaPredicted RBP13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 CD302Q8IX05 232 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 BICD1Q96G01 975 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 SPHK2Q9NRA0 654 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 DERAQ9Y315 318 aa13.56□□□□□ -0.24
PCYT1A-214ENST00000473978 TERTO14746 1132 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 PAPSS1O43252 624 aaPredicted RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 CDKL5O76039 1030 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 LDOC1O95751 146 aaPredicted RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 ABL1P00519 1130 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 OAS1P00973 400 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 MBL2P11226 248 aaPredicted RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 CDC25AP30304 524 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 ACADVLP49748 655 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 SV2CQ496J9 727 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 SNRNP27Q8WVK2 155 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 SNX19Q92543 992 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 TSC1Q92574 1164 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 OTUB2Q96DC9 234 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 HIC2Q96JB3 615 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 CNDP2Q96KP4 475 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 TM9SF3Q9HD45 589 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
PCYT1A-214ENST00000473978 GFRA2O00451 464 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 TRAK2O60296 914 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 GP1BBP13224 206 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 PLS3P13797 630 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 OXTRP30559 389 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 MAGEA11P43364 429 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 SMTNP53814 917 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 PCBP4P57723 403 aaKnown RBP13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 RAD51AP2Q09MP3 1159 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 NFATC3Q12968 1075 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 TEAD4Q15561 434 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 ZNF574Q6ZN55 896 aaPredicted RBP13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 DENND5BQ6ZUT9 1274 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 OSTM1Q86WC4 334 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 DDX42Q86XP3 938 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 BBS7Q8IWZ6 715 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 NUP58Q9BVL2 599 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 TTLL2Q9BWV7 592 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 FAM117AQ9C073 453 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 C2CD2Q9Y426 696 aa13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 HEMK1Q9Y5R4 338 aaPredicted RBP13.54□□□□□ -0.24
PCYT1A-214ENST00000473978 USP9YO00507 2555 aaPredicted RBP13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 IGLV3-19P01714 112 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 GLDCP23378 1020 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 CTSKP43235 329 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 GRIA4P48058 902 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 LIG4P49917 911 aa13.53□□□□□ -0.24
PCYT1A-214ENST00000473978 MYL7Q01449 175 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms