RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NAP1L1P55209 391 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RNASE9P60153 205 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 CSRP2Q16527 193 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ST3GAL2Q16842 350 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ZIK1Q3SY52 487 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TBRG1Q3YBR2 411 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ZNF569Q5MCW4 686 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RBM20Q5T481 1227 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 NAA35Q5VZE5 725 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TTLL5Q6EMB2 1281 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TMTC1Q8IUR5 882 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 SUGP1Q8IWZ8 645 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ADGRG5Q8IZF4 528 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ZNF808Q8N4W9 903 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TSPYL6Q8N831 410 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 PCYOX1LQ8NBM8 494 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 ASB12Q8WXK4 309 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 HERVK_113Q902F9 699 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 FAM136AQ96C01 138 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 COG8Q96MW5 612 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 GBA2Q9HCG7 927 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 SMC4Q9NTJ3 1288 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 INTS13Q9NVM9 706 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 IRAK4Q9NWZ3 460 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 IFT80Q9P2H3 777 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 HSFX1Q9UBD0 423 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 LPAR3Q9UBY5 353 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 STEAP1Q9UHE8 339 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
BRCA1-212ENST00000473961 MRPS17Q9Y2R5 130 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 RRP7AQ9Y3A4 280 aaKnown RBP4.82□□□□□ -1.64
BRCA1-212ENST00000473961 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 EYA2O00167 538 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 RNASET2O00584 256 aaKnown RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 BAIAP3O94812 1187 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 SCAF4O95104 1147 aaKnown RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 CFIP05156 583 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 ARP10275 920 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 ZNF20P17024 532 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 RXRAP19793 462 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 SERPINA4P29622 427 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 UQCRC1P31930 480 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 HIBADHP31937 336 aaKnown RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 GSTM5P46439 218 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 DGKQP52824 942 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 MPP1Q00013 466 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TIAL1Q01085 375 aaKnown RBP eCLIP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 HNRNPA0Q13151 305 aaKnown RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 CUL4BQ13620 913 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 P3H1Q32P28 736 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 CTXN3Q4LDR2 81 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TTC22Q5TAA0 569 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 MAP3K21Q5TCX8 1036 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 METRNLQ641Q3 311 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 SP5Q6BEB4 398 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TMPRSS9Q7Z410 1059 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 HERC6Q8IVU3 1022 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 CEP70Q8NHQ1 597 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 SCAMP5Q8TAC9 235 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 ZNF483Q8TF39 744 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 HMGB4Q8WW32 186 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TMEM125Q96AQ2 219 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 BOD1Q96IK1 185 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 ZSWIM1Q9BR11 485 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 VN1R3Q9BXE9 311 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 C1QTNF3Q9BXJ4 246 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TPSD1Q9BZJ3 242 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 TWSG1Q9GZX9 223 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 SMOC2Q9H3U7 446 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 GALNT9Q9HCQ5 603 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 G6PC2Q9NQR9 355 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 PPP4R1LQ9P1A2 415 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 NKX1-2Q9UD57 310 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-212ENST00000473961 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 DAPP1Q9UN19 280 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 DERAQ9Y315 318 aa4.81□□□□□ -1.64
BRCA1-212ENST00000473961 COL15A1P39059 1388 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 A6NLC8 198 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 PPP6R2O75170 966 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 IFIT1P09914 478 aaKnown RBP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 HGFP14210 728 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 KLRK1P26718 216 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 CLNS1AP54105 237 aaKnown RBP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 PNLIPRP1P54315 467 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 PRKAA2P54646 552 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 CXADRP78310 365 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 MC2RQ01718 297 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 ITIH3Q06033 890 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 CHRNDQ07001 517 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 BTBD16Q32M84 506 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 PDCD4Q53EL6 469 aaKnown RBP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 DEPDC1Q5TB30 811 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 VPS53Q5VIR6 699 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 C1QL3Q5VWW1 255 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 DENND2CQ68D51 928 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 DGAT2L7PQ6IED9 249 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 KRT27Q7Z3Y8 459 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms