RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 SPRYD3Q8NCJ5 442 aa17.27■□□□□ 0.36
HPS4-210ENST00000473782 CDC6Q99741 560 aa17.27■□□□□ 0.36
HPS4-210ENST00000473782 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
HPS4-210ENST00000473782 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
HPS4-210ENST00000473782 SNX9Q9Y5X1 595 aa17.27■□□□□ 0.36
HPS4-210ENST00000473782 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 WASH3PC4AMC7 463 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 NDUFS2O75306 463 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 SCP2P22307 547 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 PCSK1P29120 753 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 GRIK1P39086 918 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 PPP3CCP48454 512 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 TFAMQ00059 246 aaKnown RBP17.26■□□□□ 0.35
HPS4-210ENST00000473782 BBS7Q8IWZ6 715 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 OTUB2Q96DC9 234 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 TOE1Q96GM8 510 aaKnown RBP17.26■□□□□ 0.35
HPS4-210ENST00000473782 DUSP9Q99956 384 aaKnown RBP17.26■□□□□ 0.35
HPS4-210ENST00000473782 SYT15Q9BQS2 421 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 PARVGQ9HBI0 331 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 SPHK2Q9NRA0 654 aa17.26■□□□□ 0.35
HPS4-210ENST00000473782 USP36Q9P275 1121 aaKnown RBP17.26■□□□□ 0.35
HPS4-210ENST00000473782 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.26■□□□□ 0.35
HPS4-210ENST00000473782 MUC22E2RYF6 1773 aaPredicted RBP17.25■□□□□ 0.35
HPS4-210ENST00000473782 SPTA1P02549 2419 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 F8VP50 259 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 PLK4O00444 970 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 LAD1O00515 517 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 FLRT2O43155 660 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 COCHO43405 550 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 GREM1O60565 184 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 IL18RAPO95256 599 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 MBL2P11226 248 aaPredicted RBP17.25■□□□□ 0.35
HPS4-210ENST00000473782 NCAM1P13591 858 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 MATKP42679 507 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 METTL3Q86U44 580 aaKnown RBP17.25■□□□□ 0.35
HPS4-210ENST00000473782 CHPFQ8IZ52 775 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 P2RY11Q96G91 374 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 PCED1BQ96HM7 432 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 BLOC1S4Q9NUP1 217 aa17.25■□□□□ 0.35
HPS4-210ENST00000473782 NOL7Q9UMY1 257 aaKnown RBP17.25■□□□□ 0.35
HPS4-210ENST00000473782 E9PAM4 449 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 J3QKU1 62 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 BCAT2O15382 392 aaPredicted RBP17.24■□□□□ 0.35
HPS4-210ENST00000473782 CER1O95813 267 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 ABL1P00519 1130 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 DCAF12L1Q5VU92 463 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 DHRS13Q6UX07 377 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 DDX42Q86XP3 938 aaKnown RBP eCLIP17.24■□□□□ 0.35
HPS4-210ENST00000473782 CSGALNACT2Q8N6G5 542 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 CADM4Q8NFZ8 388 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 C8orf48Q96LL4 319 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 GPR174Q9BXC1 333 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 MKRN2Q9H000 416 aaKnown RBP17.24■□□□□ 0.35
HPS4-210ENST00000473782 ST6GALNAC4Q9H4F1 302 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 ITM2CQ9NQX7 267 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 CDH9Q9ULB4 789 aa17.24■□□□□ 0.35
HPS4-210ENST00000473782 A0A1B0GVT2 93 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 METTL12A8MUP2 240 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 TNFSF14O43557 240 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 FAM13AO94988 1023 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 CISD3P0C7P0 127 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 CLDN6P56747 220 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 ANAPC15P60006 121 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 KCNA1Q09470 495 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 ANO4Q32M45 955 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 BTBD8Q5XKL5 378 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 KIAA1324Q6UXG2 1013 aaKnown RBP17.23■□□□□ 0.35
HPS4-210ENST00000473782 FCRL3Q96P31 734 aaPredicted RBP17.23■□□□□ 0.35
HPS4-210ENST00000473782 STRA6Q9BX79 667 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 MIR1-1HGQ9H1L0 117 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 GMIPQ9P107 970 aa17.23■□□□□ 0.35
HPS4-210ENST00000473782 MEI4A8MW99 385 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 TRIM66O15016 1216 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 CACNG3O60359 315 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 PPP1R37O75864 691 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 PDGFRBP09619 1106 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 HLA-EP13747 358 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 CSNK1EP49674 416 aaKnown RBP17.22■□□□□ 0.35
HPS4-210ENST00000473782 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 FUT11Q495W5 492 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 PREPLQ4J6C6 727 aaPredicted RBP17.22■□□□□ 0.35
HPS4-210ENST00000473782 GRAMD4Q6IC98 578 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 IL27RAQ6UWB1 636 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 MYCBPAPQ8TBZ2 947 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 POMGNT1Q8WZA1 660 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 FAM213AQ9BRX8 229 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 DNAJC17Q9NVM6 304 aaKnown RBP17.22■□□□□ 0.35
HPS4-210ENST00000473782 EIF2B4Q9UI10 523 aaKnown RBP17.22■□□□□ 0.35
HPS4-210ENST00000473782 ITGA11Q9UKX5 1188 aa17.22■□□□□ 0.35
HPS4-210ENST00000473782 GFRA2O00451 464 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 ANXA13P27216 316 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 PGFP49763 221 aa17.21■□□□□ 0.35
HPS4-210ENST00000473782 RBP5P82980 135 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms