RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PXDNLA1KZ92 1463 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 C5P01031 1676 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MYH2Q9UKX2 1941 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TRAV20A0A0B4J274 112 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC160A6NGH7 325 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ADCY6O43306 1168 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC22O60826 627 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 KCNJ13O60928 360 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CLPTM1O96005 669 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 GLB1P16278 677 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MARCKSP29966 332 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ATP5DP30049 168 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CDC25AP30304 524 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 GJA9P57773 515 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 RNF4P78317 190 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 AMPD3Q01432 767 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 DNAJC3Q13217 504 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 NMIQ13287 307 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 AUHQ13825 339 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 PTPAQ15257 358 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ACSBG2Q5FVE4 666 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TNFAIP8L3Q5GJ75 292 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 YOD1Q5VVQ6 348 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SEZ6L2Q6UXD5 910 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 HACE1Q8IYU2 909 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CPSF7Q8N684 471 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 USP38Q8NB14 1042 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 HCAR2Q8TDS4 363 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SCFD1Q8WVM8 642 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ERP27Q96DN0 273 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 FBXL18Q96ME1 805 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 RIOK1Q9BRS2 568 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 AARSD1Q9BTE6 412 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 DHRS4Q9BTZ2 278 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TXLNGYQ9BZA5 131 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 GLT8D2Q9H1C3 349 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SNX25Q9H3E2 840 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SEMA4AQ9H3S1 761 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CAAP1Q9H8G2 361 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC38A10Q9HBR0 1119 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TCF7L2Q9NQB0 619 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TRNAU1APQ9NX07 287 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SMARCAL1Q9NZC9 954 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 AQP9O43315 295 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 RFPL3O75679 317 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SURF6O75683 361 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 FYNP06241 537 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NFICP08651 508 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 UQCRBP14927 111 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NOS3P29474 1203 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC5A2P31639 672 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CXCR5P32302 372 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT2P35908 639 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 IGHMBP2P38935 993 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 STAT2P52630 851 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 DSTNP60981 165 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 UBXN1Q04323 297 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CHRNEQ04844 493 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MGAT5Q09328 741 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 AIMP1Q12904 312 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CDC16Q13042 620 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CBX2Q14781 532 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 C16orf72Q14CZ0 275 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 KCNJ8Q15842 424 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 KCTD21Q4G0X4 260 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 KIAA1841Q6NSI8 718 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 C4orf22Q6V702 233 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PDZD8Q8NEN9 1154 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 FBLIM1Q8WUP2 373 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 ARHGEF2Q92974 986 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NINJ1Q92982 152 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CDHR1Q96JP9 859 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 DHRS9Q9BPW9 319 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 LGR4Q9BXB1 951 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CCSER1Q9C0I3 900 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CUEDC2Q9H467 287 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 IFT122Q9HBG6 1241 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NDE1Q9NXR1 346 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 WHRNQ9P202 907 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 LRP2BPQ9P2M1 347 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TFR2Q9UP52 801 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TRAF3IP3Q9Y228 551 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MRPS23Q9Y3D9 190 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 DUSP10Q9Y6W6 482 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NCAPD2Q15021 1401 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 LGALS16A8MUM7 142 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC188H7C350 402 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 TMCC2O75069 709 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MTA2O94776 668 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 MOCS3O95396 460 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SMIM18P0DKX4 95 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 NAGAP17050 411 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 IFNA8P32881 189 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 SLC1A1P43005 524 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 PPARDQ03181 441 aa5.35□□□□□ -1.55
TMEM39A-206ENST00000473684 GALNT1Q10472 559 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms