RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 OPHN1O60890 802 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 TBX18O95935 607 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 IRF1P10914 325 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 HOXB2P14652 356 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 PDE6CP51160 858 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 CDH8P55286 799 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
TRAF4-209ENST00000473421 MYO1EQ12965 1108 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 HSF5Q4G112 596 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-209ENST00000473421 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 TDRD10Q5VZ19 366 aaKnown RBP13.41□□□□□ -0.26
TRAF4-209ENST00000473421 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 SV2BQ7L1I2 683 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 BBC3Q96PG8 261 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-209ENST00000473421 GMIPQ9P107 970 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
TRAF4-209ENST00000473421 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 AP5Z1O43299 807 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 BEST1O76090 585 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 ZIC2O95409 532 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 TNNC2P02585 160 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 YWHAQP27348 245 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 NTSR1P30989 418 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 ATXN3P54252 364 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 MYL6P60660 151 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 GAD2Q05329 585 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 MAPRE1Q15691 268 aaKnown RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 ANO4Q32M45 955 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 HDDC3Q8N4P3 179 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 ZMIZ2Q8NF64 920 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SDCBP2Q9H190 292 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 XYLT2Q9H1B5 865 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SMYD3Q9H7B4 428 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 IL21RQ9HBE5 538 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SPHK2Q9NRA0 654 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 DNAAF2Q9NVR5 837 aaKnown RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 HSPBP1Q9NZL4 362 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 DEC1Q9P2X7 70 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
TRAF4-209ENST00000473421 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
TRAF4-209ENST00000473421 PTPRBP23467 1997 aa13.4□□□□□ -0.27
TRAF4-209ENST00000473421 APC2O95996 2303 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 CLIC2O15247 247 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 TACC1O75410 805 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 ZDHHC11BP0C7U3 371 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 FTH1P19P0C7X4 201 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 DLATP10515 647 aaKnown RBP13.39□□□□□ -0.27
TRAF4-209ENST00000473421 PPP3CCP48454 512 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 ORC1Q13415 861 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 RABEP1Q15276 862 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 PDZD3Q86UT5 571 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 WDR49Q8IV35 697 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 CEP76Q8TAP6 659 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 ZNF419Q96HQ0 510 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-209ENST00000473421 MRGPRX1Q96LB2 322 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 OSER1Q9NX31 292 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 CACNA2D2Q9NY47 1150 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 IL37Q9NZH6 218 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 TBC1D14Q9P2M4 693 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
TRAF4-209ENST00000473421 SLCO1B1Q9Y6L6 691 aa13.39□□□□□ -0.27
TRAF4-209ENST00000473421 A8MXQ7 604 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CBFA2T3O75081 653 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 BMP15O95972 392 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 HOXD12P35452 270 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CASP4P49662 377 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 SLC5A3P53794 718 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 BNC1Q01954 994 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 BYSLQ13895 437 aaKnown RBP13.38□□□□□ -0.27
TRAF4-209ENST00000473421 PLEKHG6Q3KR16 790 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 HECTD3Q5T447 861 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 CCNI2Q6ZMN8 369 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-209ENST00000473421 TPGS1Q6ZTW0 290 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 PDILTQ8N807 584 aa13.38□□□□□ -0.27
TRAF4-209ENST00000473421 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms