RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 MLKLQ8NB16 471 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 SLC4A11Q8NBS3 891 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 CD101Q93033 1021 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 IPO9Q96P70 1041 aaKnown RBP12.15□□□□□ -0.46
CPNE1-222ENST00000473373 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-222ENST00000473373 CSNK1G1Q9HCP0 422 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 TBC1D14Q9P2M4 693 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 MYO18AQ92614 2054 aaKnown RBP12.14□□□□□ -0.47
CPNE1-222ENST00000473373 A0A1W2PQH9 124 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 TNFRSF10BO14763 440 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 P4HA2O15460 535 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 ATG13O75143 517 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 CHRNB1P11230 501 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 RARGP13631 454 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 DRD1P21728 446 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 GJA4P35212 333 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 USP8P40818 1118 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 PSEN1P49768 467 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 TUBP50607 506 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 BCAT1P54687 386 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 ANO4Q32M45 955 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
CPNE1-222ENST00000473373 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 Q6ZS52 159 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 RRAGAQ7L523 313 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SPEM1Q8N4L4 309 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 RIN3Q8TB24 985 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 WHAMMQ8TF30 809 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
CPNE1-222ENST00000473373 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
CPNE1-222ENST00000473373 LINC00597Q9H2U6 94 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SLC8A2Q9UPR5 921 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SCML2Q9UQR0 700 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
CPNE1-222ENST00000473373 M0QYV0 167 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 RNF40O75150 1001 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 EGFP01133 1207 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 TPM2P07951 284 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 VDRP11473 427 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 ADH5P11766 374 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 PRKCSHP14314 528 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-222ENST00000473373 TCF3P15923 654 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 GALK1P51570 392 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 SATB1Q01826 763 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 BST2Q10589 180 aaKnown RBP12.13□□□□□ -0.47
CPNE1-222ENST00000473373 PUM1Q14671 1186 aaKnown RBP eCLIP12.13□□□□□ -0.47
CPNE1-222ENST00000473373 ZNF528Q3MIS6 628 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 PRR23BQ6ZRT6 265 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 CCDC26Q8TAB7 109 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 RUBCNQ92622 972 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 CHFRQ96EP1 664 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
CPNE1-222ENST00000473373 ZSCAN32Q9NX65 697 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 DNMT3LQ9UJW3 386 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 STRIP2Q9ULQ0 834 aa12.13□□□□□ -0.47
CPNE1-222ENST00000473373 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 OTOL1A6NHN0 477 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 APODP05090 189 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 HMBSP08397 361 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 LCP1P13796 627 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 TKTL1P51854 596 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 KIF11P52732 1056 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 SEC13P55735 322 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 KDSRQ06136 332 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 PDE4CQ08493 712 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 DHCR24Q15392 516 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-222ENST00000473373 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 TMEM196Q5HYL7 178 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 ARHGAP17Q68EM7 881 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 NUDT18Q6ZVK8 323 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 CEP68Q76N32 757 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 CCDC186Q7Z3E2 898 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 PIGZQ86VD9 579 aa12.12□□□□□ -0.47
CPNE1-222ENST00000473373 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms