RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 STK32BQ9NY57 414 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 MTMR4Q9NYA4 1195 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 MAFFQ9ULX9 164 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 USP19O94966 1318 aa5.71□□□□□ -1.5
CD46-213ENST00000471987 CFAP69A5D8W1 941 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 H3BNC9 293 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 H7C4K7 107 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 ADAM10O14672 748 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 FRS3O43559 492 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 RRP9O43818 475 aaKnown RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 SNHG28P0DPA3 235 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 BRAFP15056 766 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 VSTM1Q6UX27 236 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 RANBP10Q6VN20 620 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 KCTD20Q7Z5Y7 419 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 LIX1LQ8IVB5 337 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 MAFAQ8NHW3 353 aaPredicted RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 SMCR8Q8TEV9 937 aaPredicted RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 MAP4K1Q92918 833 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 ZBTB45Q96K62 511 aaPredicted RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 DHX36Q9H2U1 1008 aaKnown RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 AFF4Q9UHB7 1163 aaKnown RBP5.7□□□□□ -1.5
CD46-213ENST00000471987 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
CD46-213ENST00000471987 GATMP50440 423 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 PGDP52209 483 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 KCNB1Q14721 858 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 CNN3Q15417 329 aaKnown RBP5.69□□□□□ -1.5
CD46-213ENST00000471987 NPY5RQ15761 445 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 AWAT1Q58HT5 328 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 SIGLEC11Q96RL6 698 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 STK31Q9BXU1 1019 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 C1orf112Q9NSG2 853 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 HDAC9Q9UKV0 1011 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 L1RE1Q9UN81 338 aa5.69□□□□□ -1.5
CD46-213ENST00000471987 LY6G6EA0A0G2JKS1 128 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 EXOC5O00471 708 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 PIAS2O75928 621 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 HGFP14210 728 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 PRF1P14222 555 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 CD19P15391 556 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 HOXD9P28356 352 aaPredicted RBP5.68□□□□□ -1.5
CD46-213ENST00000471987 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
CD46-213ENST00000471987 CFHR3Q02985 330 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 ZNF91Q05481 1191 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 ZNF750Q32MQ0 723 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 MINDY4Q4G0A6 757 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 TMTC4Q5T4D3 741 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 APOA5Q6Q788 366 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 IRF2BP2Q7Z5L9 587 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 C16orf71Q8IYS4 520 aaPredicted RBP5.68□□□□□ -1.5
CD46-213ENST00000471987 WDYHV1Q96HA8 205 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 ZNF668Q96K58 619 aaPredicted RBP5.68□□□□□ -1.5
CD46-213ENST00000471987 EBF3Q9H4W6 596 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
CD46-213ENST00000471987 NKX1-2Q9UD57 310 aaPredicted RBP5.68□□□□□ -1.5
CD46-213ENST00000471987 AQP7P3A6NL99 342 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
CD46-213ENST00000471987 SCP2P22307 547 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 ITGA8P53708 1063 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 CACNB3P54284 484 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 ID2Q02363 134 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 SLC29A2Q14542 456 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 CNGA2Q16280 664 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 DEF8Q6ZN54 512 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 SAMD14Q8IZD0 417 aaPredicted RBP5.67□□□□□ -1.5
CD46-213ENST00000471987 NSMCE1Q8WV22 266 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 VCPIP1Q96JH7 1222 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 RGS17Q9UGC6 210 aaPredicted RBP5.67□□□□□ -1.5
CD46-213ENST00000471987 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 ZMYM2Q9UBW7 1377 aa5.67□□□□□ -1.5
CD46-213ENST00000471987 A8MVJ9 347 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 PARP1P09874 1014 aaKnown RBP5.66□□□□□ -1.5
CD46-213ENST00000471987 ATF7P17544 494 aaPredicted RBP5.66□□□□□ -1.5
CD46-213ENST00000471987 ACVR2AP27037 513 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 CPT1AP50416 773 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 STK3Q13188 491 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 SEC23BQ15437 767 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 ST3GAL2Q16842 350 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 TRIM71Q2Q1W2 868 aaKnown RBP5.66□□□□□ -1.5
CD46-213ENST00000471987 ODR4Q5SWX8 454 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 CC2D1BQ5T0F9 858 aaKnown RBP5.66□□□□□ -1.5
CD46-213ENST00000471987 YAF2Q8IY57 180 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 C12orf76Q8N812 135 aaPredicted RBP5.66□□□□□ -1.5
CD46-213ENST00000471987 PNPLA1Q8N8W4 532 aa5.66□□□□□ -1.5
CD46-213ENST00000471987 RAB27BO00194 218 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 CLIC1O00299 241 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 PRPF3O43395 683 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 TLR2O60603 784 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 INMTO95050 263 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 TXNP10599 105 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 TPH1P17752 444 aa5.65□□□□□ -1.5
CD46-213ENST00000471987 TKTP29401 623 aaKnown RBP5.65□□□□□ -1.5
CD46-213ENST00000471987 MCM5P33992 734 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms