RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PDGFRBP09619 1106 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 KCNE1P15382 129 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 MSH2P43246 934 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 ZKSCAN8Q15776 578 aaPredicted RBP18.13■□□□□ 0.49
RRP1-202ENST00000471909 SAPCD2Q86UD0 394 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 RFX6Q8HWS3 928 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 C7orf31Q8N865 590 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 SMG8Q8ND04 991 aaKnown RBP18.13■□□□□ 0.49
RRP1-202ENST00000471909 GDAP1Q8TB36 358 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 FOXP3Q9BZS1 431 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 HESX1Q9UBX0 185 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 IPPQ9Y573 584 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 A8MUI8 341 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 PAPSS1O43252 624 aaPredicted RBP18.13■□□□□ 0.49
RRP1-202ENST00000471909 ENDOD1O94919 500 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 SETSIPP0DME0 302 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 PECAM1P16284 738 aaPredicted RBP18.13■□□□□ 0.49
RRP1-202ENST00000471909 LMO2P25791 158 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 CTGFP29279 349 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 MMRN1Q13201 1228 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 ZNF618Q5T7W0 954 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 ARHGAP17Q68EM7 881 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 RGMBQ6NW40 437 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 FITM2Q8N6M3 262 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 SOCS4Q8WXH5 440 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 ZNF570Q96NI8 536 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 B3GNT5Q9BYG0 378 aa18.13■□□□□ 0.49
RRP1-202ENST00000471909 FRMD8P1Q9BZ68 369 aaPredicted RBP18.13■□□□□ 0.49
RRP1-202ENST00000471909 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.49
RRP1-202ENST00000471909 TRIP12Q14669 1992 aaPredicted RBP18.12■□□□□ 0.49
RRP1-202ENST00000471909 MAGEA4P43358 317 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 ATP11AP98196 1134 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 SLC6A3Q01959 620 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
RRP1-202ENST00000471909 NME8Q8N427 588 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 TGS1Q96RS0 853 aaKnown RBP18.12■□□□□ 0.49
RRP1-202ENST00000471909 SLC24A3Q9HC58 644 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 APOC4-APOC2K7ER74 178 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 APOC2P02655 101 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 CCDC130P13994 396 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 BRAFP15056 766 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 MORF4L2Q15014 288 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 TRPV1Q8NER1 839 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 RSAD1Q9HA92 442 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 KLHL14Q9P2G3 628 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 CTNNAL1Q9UBT7 734 aa18.12■□□□□ 0.49
RRP1-202ENST00000471909 PRPSAP2O60256 369 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 TCEA3O75764 348 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 GNAT1P11488 350 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 STX2P32856 288 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 GNL1P36915 607 aaPredicted RBP18.11■□□□□ 0.49
RRP1-202ENST00000471909 CDH6P55285 790 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 ASRGL1Q7L266 308 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 CRYBG2Q8N1P7 616 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 STK32AQ8WU08 396 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 SAYSD1Q9NPB0 183 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 PRKAG3Q9UGI9 489 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 DPYSL4O14531 572 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 SKAP2O75563 359 aaPredicted RBP18.11■□□□□ 0.49
RRP1-202ENST00000471909 AKR1A1P14550 325 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 CRHR2Q13324 411 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 DPYSL3Q14195 570 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 CYP4F22Q6NT55 531 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 RMDN2Q96LZ7 410 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 ZNF560Q96MR9 790 aa18.11■□□□□ 0.49
RRP1-202ENST00000471909 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 ATP2A2P16615 1042 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 ADORA2BP29275 332 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 TAF6P49848 677 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 FASTKD3Q14CZ7 662 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 LIMS2Q7Z4I7 341 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 ANKRD52Q8NB46 1076 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 ZFYVE28Q9HCC9 887 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 TRIM33Q9UPN9 1127 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 HGSO14964 777 aaPredicted RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 XPOTO43592 962 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 PNPLA4P41247 253 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 EIF3EP60228 445 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 TWF2Q6IBS0 349 aaKnown RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 SCYL2Q6P3W7 929 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 NPNTQ6UXI9 565 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 CEP128Q6ZU80 1094 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 APPL2Q8NEU8 664 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 CLEC4CQ8WTT0 213 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 FAM172AQ8WUF8 416 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 SPDL1Q96EA4 605 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 TSPAN18Q96SJ8 248 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 SNX25Q9H3E2 840 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 SHOC2Q9UQ13 582 aa18.1■□□□□ 0.49
RRP1-202ENST00000471909 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
RRP1-202ENST00000471909 FOXO6A8MYZ6 492 aa18.09■□□□□ 0.49
RRP1-202ENST00000471909 PPP1R12AO14974 1030 aaPredicted RBP18.09■□□□□ 0.49
RRP1-202ENST00000471909 SLC10A3P09131 477 aa18.09■□□□□ 0.49
RRP1-202ENST00000471909 CCNB1P14635 433 aa18.09■□□□□ 0.49
RRP1-202ENST00000471909 SDC4P31431 198 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms