RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CFHR3Q02985 330 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 PFKFB3Q16875 520 aaPredicted RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 AWAT1Q58HT5 328 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TMTC4Q5T4D3 741 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 B3GNT9Q6UX72 402 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 ANKRD13BQ86YJ7 626 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 C12orf76Q8N812 135 aaPredicted RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 ZBTB34Q8NCN2 500 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 MAFAQ8NHW3 353 aaPredicted RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 VCPIP1Q96JH7 1222 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TAAR9Q96RI9 348 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 STK31Q9BXU1 1019 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TRIM36Q9NQ86 728 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TYW1Q9NV66 732 aaKnown RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 TMEM184CQ9NVA4 438 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 GAR1Q9NY12 217 aaKnown RBP4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 HDAC9Q9UKV0 1011 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 SQORQ9Y6N5 450 aa4.19□□□□□ -1.74
PRPF40A-207ENST00000471701 hCG_2014768A0A024R1R8 64 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 LY6G6EA0A0G2JKS1 128 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 CFAP69A5D8W1 941 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 MBD3L4A6NDZ8 208 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 MBD3L3A6NE82 208 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 CD3EAPO15446 510 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 AKAP10O43572 662 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 SPRY2O43597 315 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 TLR2O60603 784 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 OAZ2O95190 189 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 U2AF1L5P0DN76 240 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 CYP19A1P11511 503 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 PTDSS1P48651 473 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 PGDP52209 483 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 ITGA8P53708 1063 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 RPS13P62277 151 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 U2AF1Q01081 240 aaKnown RBP eCLIP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 MCL1Q07820 350 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 STIM1Q13586 685 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 ARHGEF7Q14155 803 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 SLC29A2Q14542 456 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 KCNB1Q14721 858 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 FAM110CQ1W6H9 321 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 CRELD2Q6UXH1 353 aaPredicted RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 KCTD20Q7Z5Y7 419 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 FAM71DQ8N9W8 422 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 OR56A3Q8NH54 315 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 WASF1Q92558 559 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 VPS50Q96JG6 964 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 WWOXQ9NZC7 414 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 ZNF580Q9UK33 172 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 TPCN1Q9ULQ1 816 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 HS3ST3B1Q9Y662 390 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 USP19O94966 1318 aa4.18□□□□□ -1.74
PRPF40A-207ENST00000471701 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 ANKRD62A6NC57 917 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 ISM1B1AKI9 464 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 H7C4K7 107 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 TBX3O15119 743 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 SNX2O60749 519 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 RFPL1O75677 317 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 PIAS2O75928 621 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CRYABP02511 175 aaKnown RBP4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CD63P08962 238 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 MYBP10242 640 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CTSAP10619 480 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 BRAFP15056 766 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 TACR3P29371 465 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 IGBP1P78318 339 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 HSF1Q00613 529 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 STK3Q13188 491 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 MFSD13AQ14CX5 517 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 DEF8Q6ZN54 512 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CHPFQ8IZ52 775 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 TRMOQ9BU70 441 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 B3GNT5Q9BYG0 378 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 ATP6V0A4Q9HBG4 840 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 USP29Q9HBJ7 922 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CPNE7Q9UBL6 633 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 CNTNAP2Q9UHC6 1331 aa4.17□□□□□ -1.74
PRPF40A-207ENST00000471701 TRIM43BA6NCK2 446 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 RAB27BO00194 218 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 PDGFRBP09619 1106 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 HGFP14210 728 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 TPH1P17752 444 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 KLRC1P26715 233 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 CPA2P48052 419 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 LINC00205P59089 165 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 TIAL1Q01085 375 aaKnown RBP eCLIP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 ZNF750Q32MQ0 723 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 SLC9C1Q4G0N8 1177 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 MIDNQ504T8 468 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 EPM2AIP1Q7L775 607 aaPredicted RBP4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 OVCH2Q7RTZ1 564 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 UBE2Q1Q7Z7E8 422 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 MICU3Q86XE3 530 aa4.16□□□□□ -1.74
PRPF40A-207ENST00000471701 YAF2Q8IY57 180 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms