RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 UBXN6Q9BZV1 441 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
HDAC6-218ENST00000470942 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 DACH1Q9UI36 760 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 NAGPAQ9UK23 515 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 TSPAN16Q9UKR8 245 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
HDAC6-218ENST00000470942 E2F8A0AVK6 867 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 TBX18O95935 607 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 RARGP13631 454 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 ATP5C1P36542 298 aaKnown RBP16.53■□□□□ 0.24
HDAC6-218ENST00000470942 CXCL12P48061 93 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 CCR3P51677 355 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 BCAT1P54687 386 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 CCINQ13939 588 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 GAS6Q14393 721 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 PPP2R5DQ14738 602 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 DPCR1Q3MIW9 517 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 TMEM196Q5HYL7 178 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 FSTL4Q6MZW2 842 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 Q6ZS52 159 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 PIGZQ86VD9 579 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 SYNPOQ8N3V7 929 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 SPEM1Q8N4L4 309 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 KIAA1958Q8N8K9 716 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 CD101Q93033 1021 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 ZFRQ96KR1 1074 aaKnown RBP16.53■□□□□ 0.24
HDAC6-218ENST00000470942 CRACR2AQ9BSW2 395 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 PRMT8Q9NR22 394 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-218ENST00000470942 OSER1Q9NX31 292 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 TBC1D14Q9P2M4 693 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 NUDT5Q9UKK9 219 aa16.53■□□□□ 0.24
HDAC6-218ENST00000470942 RNF225M0QZC1 329 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 EGFP01133 1207 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 PAEPP09466 180 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 RALAP11233 206 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 DRD1P21728 446 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 PSEN1P49768 467 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 SATB1Q01826 763 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 GCNT1Q02742 428 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 PDE4CQ08493 712 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 BST2Q10589 180 aaKnown RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 C10orf120Q5SQS8 335 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 MAMSTRQ6ZN01 415 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 SCD5Q86SK9 330 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 IRF2BP1Q8IU81 584 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 RBBP8NLQ8NC74 664 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 FBRSL1Q9HCM7 1045 aaKnown RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 CYLDQ9NQC7 956 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC6-218ENST00000470942 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
HDAC6-218ENST00000470942 WDR87Q6ZQQ6 2873 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 PRR23AA6NEV1 266 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 TULP2O00295 520 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 O00370 1275 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 XPO1O14980 1071 aaKnown RBP16.51■□□□□ 0.23
HDAC6-218ENST00000470942 MDM4O15151 490 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 CYP17A1P05093 508 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 ERCC5P28715 1186 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-218ENST00000470942 TKTL1P51854 596 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 GOLGA8FQ08AF8 430 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 GOLGA8DPQ0D2H9 430 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 DHCR24Q15392 516 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 ASCL5Q7RTU5 278 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 FAM114A1Q8IWE2 563 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 TFAP2BQ92481 460 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 WBP2Q969T9 261 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 KLF16Q9BXK1 252 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-218ENST00000470942 SEMA4AQ9H3S1 761 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 THAP9Q9H5L6 903 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 LRRC4Q9HBW1 653 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 ZSCAN32Q9NX65 697 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 VPS13AQ96RL7 3174 aa16.51■□□□□ 0.23
HDAC6-218ENST00000470942 MYO15AQ9UKN7 3530 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 DMDP11532 3685 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 ADH1CP00326 375 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 CALCAP01258 141 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 KRT5P13647 590 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
HDAC6-218ENST00000470942 HSP90AA4PQ58FG1 418 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 RAB41Q5JT25 222 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 GBP6Q6ZN66 633 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 ARHGAP18Q8N392 663 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 OTUB2Q96DC9 234 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 KREMEN1Q96MU8 473 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 ULBP1Q9BZM6 244 aa16.5■□□□□ 0.23
HDAC6-218ENST00000470942 DNMT3LQ9UJW3 386 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms