RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 UNC93AQ86WB7 457 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 ZNF687Q8N1G0 1237 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 CPA6Q8N4T0 437 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 SLC35C1Q96A29 364 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 IER2Q9BTL4 223 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 TTLL2Q9BWV7 592 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 NAA15Q9BXJ9 866 aaKnown RBP16.93■□□□□ 0.3
COL16A1-209ENST00000470799 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 HMGXB4Q9UGU5 601 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 WNT6Q9Y6F9 365 aa16.93■□□□□ 0.3
COL16A1-209ENST00000470799 MFAP3LO75121 409 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 SKILP12757 684 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 ADORA2BP29275 332 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 CASP14P31944 242 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 CXCL12P48061 93 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 MXI1P50539 228 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 NRLP54845 237 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 CCZ1BP86790 482 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 CCZ1P86791 482 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-209ENST00000470799 LRMPQ12912 555 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 NR1H3Q13133 447 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 PDZD8Q8NEN9 1154 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 RIN3Q8TB24 985 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 ATP2A3Q93084 1043 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 PCMTD1Q96MG8 357 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-209ENST00000470799 NT5C1AQ9BXI3 368 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 NACA2Q9H009 215 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 APOBEC3GQ9HC16 384 aaKnown RBP16.92■□□□□ 0.3
COL16A1-209ENST00000470799 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 CHORDC1Q9UHD1 332 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-209ENST00000470799 ARHGAP26Q9UNA1 814 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
COL16A1-209ENST00000470799 PCDHGA2Q9Y5H1 932 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 F5P12259 2224 aa16.92■□□□□ 0.3
COL16A1-209ENST00000470799 PMM2O15305 246 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 P4HA2O15460 535 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 FAM200BP0CF97 657 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-209ENST00000470799 PFKLP17858 780 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 SLC5A3P53794 718 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
COL16A1-209ENST00000470799 MAP3K7CLP57077 242 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 ZNF77Q15935 545 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 TSR1Q2NL82 804 aaKnown RBP16.91■□□□□ 0.3
COL16A1-209ENST00000470799 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 CRYBG2Q8N1P7 616 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 SPEM1Q8N4L4 309 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-209ENST00000470799 SCAMP5Q8TAC9 235 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 JAKMIP2Q96AA8 810 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 TTYH3Q9C0H2 523 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 PRMT8Q9NR22 394 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-209ENST00000470799 MIA3Q5JRA6 1907 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 TICRRQ7Z2Z1 1910 aa16.91■□□□□ 0.3
COL16A1-209ENST00000470799 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-209ENST00000470799 LEFTY2O00292 366 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-209ENST00000470799 FECHP22830 423 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 KRT9P35527 623 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 ZBED6P86452 979 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 SATB1Q01826 763 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 USP4Q13107 963 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 ZNF394Q53GI3 561 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 GBP6Q6ZN66 633 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 Q6ZS52 159 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-209ENST00000470799 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-209ENST00000470799 RNF38Q9H0F5 515 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 LINC00597Q9H2U6 94 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 PLCB1Q9NQ66 1216 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 RAB20Q9NX57 234 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 DAAM1Q9Y4D1 1078 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 CPQQ9Y646 472 aa16.9■□□□□ 0.3
COL16A1-209ENST00000470799 NFATC1O95644 943 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 EXOC3L4Q17RC7 722 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 HECTD3Q5T447 861 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 OVCA2Q8WZ82 227 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 HEXIM2Q96MH2 286 aaKnown RBP16.89■□□□□ 0.29
COL16A1-209ENST00000470799 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
COL16A1-209ENST00000470799 SMOQ99835 787 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms