RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CYP3A5P20815 502 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PIK3CAP42336 1068 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 RGS19P49795 217 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FXR1P51114 621 aaKnown RBP eCLIP5.06□□□□□ -1.65e-6■■■□□ 17
SF3B1-208ENST00000470268 NOP14P78316 857 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TBX2Q13207 712 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TUSC3Q13454 348 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 HSP90AA2PQ14568 343 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 SHHQ15465 462 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FKBP15Q5T1M5 1219 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ZBTB37Q5TC79 503 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 E4F1Q66K89 784 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 SPECC1LQ69YQ0 1117 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TMC6Q7Z403 805 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 SPRED2Q7Z698 418 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TMEM173Q86WV6 379 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 COLGALT2Q8IYK4 626 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 BEST2Q8NFU1 509 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ANAPC16Q96DE5 110 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 KREMEN1Q96MU8 473 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FANCD2OSQ96PS1 177 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GDF15Q99988 308 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 LBHD1Q9BQE6 289 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 LSM14BQ9BX40 385 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NAA15Q9BXJ9 866 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GPR88Q9GZN0 384 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 CWH43Q9H720 699 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NLRC4Q9NPP4 1024 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PLCB1Q9NQ66 1216 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GMIPQ9P107 970 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 APEX2Q9UBZ4 518 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 REV1Q9UBZ9 1251 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ITGA11Q9UKX5 1188 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NR2E3Q9Y5X4 410 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TTC3P53804 2025 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ITIH6Q6UXX5 1313 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ANK1P16157 1881 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 LCHNA4D1U4 455 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 USP27XA6NNY8 438 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 GRXCR1A8MXD5 290 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 NT5C1B-RDH14C9J2C7 533 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 I3L4J1 428 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 PODXLO00592 558 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 KLF4O43474 513 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HCRTO43612 131 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ZC3H11AO75152 810 aaKnown RBP eCLIP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 MED26O95402 600 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 GALTP07902 379 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 SPINK2P20155 84 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 CASP14P31944 242 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 NTF4P34130 210 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ASPAP45381 313 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 KCNJ6P48051 423 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 CDH8P55286 799 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 LILRA4P59901 499 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 POLR2FP61218 127 aaKnown RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 RBP5P82980 135 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HTRA4P83105 476 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 TRPC3Q13507 836 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 SGSM1Q2NKQ1 1148 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 WDR72Q3MJ13 1102 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HS1BP3Q53T59 392 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 PPM1JQ5JR12 505 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 FBXW10Q5XX13 1052 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 IQCEQ6IPM2 695 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 FDX2Q6P4F2 183 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ANKS3Q6ZW76 656 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 LSRQ86X29 649 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ZDHHC13Q8IUH4 622 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HERC6Q8IVU3 1022 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 ABI1Q8IZP0 508 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 PPM1KQ8N3J5 372 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HASPINQ8TF76 798 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 BCL7CQ8WUZ0 217 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 HPDLQ96IR7 371 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 TSPAN18Q96SJ8 248 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 SDCBP2Q9H190 292 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 UBE2TQ9NPD8 197 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 SLC38A7Q9NVC3 462 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 MARCH5Q9NX47 278 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 DNAJC12Q9UKB3 198 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 PRG3Q9Y2Y8 225 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 NME7Q9Y5B8 376 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 CORINQ9Y5Q5 1042 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 MRPL42Q9Y6G3 142 aaKnown RBP5.05□□□□□ -1.6
SF3B1-208ENST00000470268 SLC4A7Q9Y6M7 1214 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 MICAL3Q7RTP6 2002 aa5.05□□□□□ -1.6
SF3B1-208ENST00000470268 PRAMEF27A3QJZ7 478 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 KPNA7A9QM74 516 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 NRP1O14786 923 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 XPOTO43592 962 aaKnown RBP5.04□□□□□ -1.6
SF3B1-208ENST00000470268 B3GAT3O94766 335 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 TGFB1P01137 390 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 CALCAP01258 141 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 TPM3P06753 285 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 WEE2P0C1S8 567 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 MYOGP15173 224 aa5.04□□□□□ -1.6
SF3B1-208ENST00000470268 ATP2A2P16615 1042 aaKnown RBP5.04□□□□□ -1.6
SF3B1-208ENST00000470268 TRIM21P19474 475 aaKnown RBP5.04□□□□□ -1.6
SF3B1-208ENST00000470268 ACO1P21399 889 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms