RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 BARX2Q9UMQ3 279 aaPredicted RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.075e-7■■■■□ 23.7
SMC4-212ENST00000470240 DERAQ9Y315 318 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ANK1P16157 1881 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 RRN3P2A6NIE6 340 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 UNCXA6NJT0 531 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 LACTBL1A8MY62 500 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZBTB42B2RXF5 422 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 POC1B-GALNT4F8VUJ3 575 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ALOX15BO15296 676 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 PRPF4O43172 522 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMC4-212ENST00000470240 B4GALT5O43286 388 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 SNX3O60493 162 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZNF189O75820 626 aaPredicted RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 ATP5HO75947 161 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZWINTO95229 277 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 INSRRP14616 1297 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 TGM2P21980 687 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 HNRNPH1P31943 449 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 RFC1P35251 1148 aaPredicted RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 GABRB2P47870 512 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZNF143P52747 638 aaPredicted RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 GEMIN4P57678 1058 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 BASP1P80723 227 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 SLC25A11Q02978 314 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 PPARDQ03181 441 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 OASLQ15646 514 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 GNASQ5JWF2 1037 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 DAB2IPQ5VWQ8 1189 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 EEF1DP3Q658K8 133 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ICE2Q659A1 982 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 OR6B2Q6IFH4 312 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 CCDC62Q6P9F0 684 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 DARS2Q6PI48 645 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 SESTD1Q86VW0 696 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 XYLT1Q86Y38 959 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ZDHHC17Q8IUH5 632 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 SLC35B2Q8TB61 432 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ACTL9Q8TC94 416 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 LRRC8CQ8TDW0 803 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 TRAPPC12Q8WVT3 735 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 HSPH1Q92598 858 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 TSPAN18Q96SJ8 248 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 FAM118BQ9BPY3 351 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 PAIP2Q9BPZ3 127 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 FERMT1Q9BQL6 677 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 TMEM121Q9BTD3 319 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ADAM7Q9H2U9 754 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 PDZD7Q9H5P4 517 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 SMYD3Q9H7B4 428 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 PLEKHA5Q9HAU0 1116 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 FGFR1OP2Q9NVK5 253 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 DPP3Q9NY33 737 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 RNF181Q9P0P0 153 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 RBPJLQ9UBG7 517 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 USP18Q9UMW8 372 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 AGAP1Q9UPQ3 857 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 NAALADL1Q9UQQ1 740 aa8.35□□□□□ -1.07
SMC4-212ENST00000470240 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.35□□□□□ -1.07
SMC4-212ENST00000470240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 A0A087WZ62 844 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 IQANK1A0A1B0GTG1 560 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 H7C0C1 242 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 APOL1O14791 398 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 CHUKO15111 745 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 STRNO43815 780 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 LRCH4O75427 683 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 DCTN3O75935 186 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 ERBB2P04626 1255 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TROVE2P10155 538 aaKnown RBP eCLIP8.34□□□□□ -1.071e-12■■■■■ 61.2
SMC4-212ENST00000470240 ZFXP17010 805 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 CA4P22748 312 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 MIPP30301 263 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SDC4P31431 198 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 MSH2P43246 934 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 RAP1GAPP47736 663 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 ATP5OP48047 213 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 GCLCP48506 637 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 CDH6P55285 790 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 SLC8A3P57103 927 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 OGDHQ02218 1023 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 INCA1Q0VD86 236 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 ACVR2BQ13705 512 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 LRRC14Q15048 493 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 TLR1Q15399 786 aa8.34□□□□□ -1.07
SMC4-212ENST00000470240 KCTD19Q17RG1 926 aaPredicted RBP8.34□□□□□ -1.07
SMC4-212ENST00000470240 SMTNL2Q2TAL5 461 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms