RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ANXA13P27216 316 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 PCSK1P29120 753 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 MAGEA11P43364 429 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 TRAPPC10P48553 1259 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 LHX1P48742 406 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 NCKAP1LP55160 1127 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 POU5F1Q01860 360 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 KDSRQ06136 332 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 RAD51AP2Q09MP3 1159 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 GAB4Q2WGN9 574 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 CFAP221Q4G0U5 840 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 RHBDF2Q6PJF5 856 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 SPATA17Q96L03 361 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF396Q96N95 335 aaPredicted RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF830Q96NB3 372 aaPredicted RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 MAGEC2Q9UBF1 373 aaPredicted RBP9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 TENM4Q6N022 2769 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 SCN1AP35498 2009 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 ANAPC1Q9H1A4 1944 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 TEX51A0A1B0GUA7 166 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 MEI4A8MW99 385 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 TNFSF14O43557 240 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 FAM189A1O60320 539 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 ABL1P00519 1130 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 PIGRP01833 764 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 ATXN1LP0C7T5 689 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 GRIK1P39086 918 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 MAPRE1Q15691 268 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CAMK4Q16566 473 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 SPC24Q8NBT2 197 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 NSUN7Q8NE18 718 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CACTINQ8WUQ7 758 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 DNASE2BQ8WZ79 361 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 BAP1Q92560 729 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 KCNN1Q92952 543 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CRELD1Q96HD1 420 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 FOXP1Q9H334 677 aaPredicted RBP9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 PRORYQ9H606 182 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CFAP45Q9UL16 551 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 CPQQ9Y646 472 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 TSC2P49815 1807 aa9.49□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 E2F8A0AVK6 867 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 LAD1O00515 517 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 DYNC1I1O14576 645 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 BCAT2O15382 392 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CILPO75339 1184 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 DKK1O94907 266 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 IL18RAPO95256 599 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CDK4P11802 303 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 NDUFV2P19404 249 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 MAOBP27338 520 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CD6P30203 668 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 OXTRP30559 389 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 HNF1BP35680 557 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 EIF2S3P41091 472 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZXDBP98169 803 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CFHR1Q03591 330 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZRSR1Q15695 479 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 SMAD1Q15797 465 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 HLA-BQ31612 363 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 ANO6Q4KMQ2 910 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 LY6G5CQ5SRR4 150 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 TDRD10Q5VZ19 366 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 DTHD1Q6ZMT9 781 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 DBX2Q6ZNG2 339 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 GPR155Q7Z3F1 870 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 C12orf40Q86WS4 652 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 SFTPA1Q8IWL2 248 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CHPFQ8IZ52 775 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 C4orf32Q8N8J7 132 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 SYT2Q8N9I0 419 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CADM4Q8NFZ8 388 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 BAHD1Q8TBE0 780 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 NXPE2Q96DL1 559 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 MIR1-1HGQ9H1L0 117 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CBX8Q9HC52 389 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZDHHC4Q9NPG8 344 aa9.48□□□□□ -0.89
SYNGAP1-205ENST00000470232 CFAP97Q9P2B7 532 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms