RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 EFHC1Q5JVL4 640 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 CYP4A22Q5TCH4 519 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 SNX30Q5VWJ9 437 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 TRNP1Q6NT89 227 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 LLGL2Q6P1M3 1020 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 DNAJC24Q6P3W2 148 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 SLC22A17Q8WUG5 538 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 POF1BQ8WVV4 589 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 WDR24Q96S15 920 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 MED10Q9BTT4 135 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 DDX23Q9BUQ8 820 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 MSRAQ9UJ68 235 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 SCML2Q9UQR0 700 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 PAXBP1Q9Y5B6 917 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 MYH10P35580 1976 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 LPXNO60711 386 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 PROSCO94903 275 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 MOCS3O95396 460 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ZBED1O96006 694 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ADH1AP07327 375 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 KRT3P12035 628 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 PRLRP16471 622 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 HMGA1P17096 107 aaKnown RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ATF6P18850 670 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 RFC1P35251 1148 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TKTL1P51854 596 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF143P52747 638 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ADIGQ0VDE8 80 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 DUSP4Q13115 394 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 KCNC3Q14003 757 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 MEI1Q5TIA1 1274 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 PAPD7Q5XG87 772 aaKnown RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 NT5DC3Q86UY8 548 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 SCUBE3Q8IX30 993 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 SYCE1Q8N0S2 351 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 NUP93Q8N1F7 819 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TTC9BQ8N6N2 239 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 JOSD2Q8TAC2 188 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 OVCA2Q8WZ82 227 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 PGAP3Q96FM1 320 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TRMT2BQ96GJ1 504 aaKnown RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TCF25Q9BQ70 676 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ULBP1Q9BZM6 244 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TRIM7Q9C029 511 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 LRRC4Q9HBW1 653 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ALG13Q9NP73 1137 aaKnown RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 TMEM51Q9NW97 253 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ABI2Q9NYB9 513 aaPredicted RBP8.56□□□□□ -1.04
NPHP3-204ENST00000469232 CTTNBP2NLQ9P2B4 639 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 JRKLQ9Y4A0 524 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ALG6Q9Y672 507 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 ATG2AQ2TAZ0 1938 aa8.56□□□□□ -1.04
NPHP3-204ENST00000469232 MACROD2A1Z1Q3 448 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 HIDE1A8MVS5 230 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 TGM5O43548 720 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 HSF2BPO75031 334 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 DAB1O75553 588 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 PALMO75781 387 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 RTN3O95197 1032 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-204ENST00000469232 IGLV3-25P01717 112 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 CTNNA2P26232 953 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 HOXA9P31269 272 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 GRIK1P39086 918 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 SLC1A1P43005 524 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 CLCN4P51793 760 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 SLC5A3P53794 718 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 AMPD2Q01433 879 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 GPM6BQ13491 265 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-204ENST00000469232 TAF5Q15542 800 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 LRRC38Q5VT99 294 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 OTUD1Q5VV17 481 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-204ENST00000469232 OR6B2Q6IFH4 312 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 MSANTD2Q6P1R3 559 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 SCD5Q86SK9 330 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 MON1AQ86VX9 555 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 ARFGAP1Q8N6T3 406 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 AUTS2Q8WXX7 1259 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 HES6Q96HZ4 224 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 NPY6RQ99463 290 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 NCAPGQ9BPX3 1015 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 CNPY3Q9BT09 278 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 TRIM62Q9BVG3 475 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 TLR10Q9BXR5 811 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 EMILIN2Q9BXX0 1053 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 NKX2-4Q9H2Z4 354 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 FBXO44Q9H4M3 255 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 PLEKHA4Q9H4M7 779 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 ST7Q9NRC1 585 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 RRN3Q9NYV6 651 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 CHORDC1Q9UHD1 332 aaPredicted RBP8.55□□□□□ -1.04
NPHP3-204ENST00000469232 ANAPC7Q9UJX3 599 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms