RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 RSPH10B2B2RC85 870 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GOLGA8NF8WBI6 632 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GOLGA8RI6L899 631 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TM9SF1O15321 606 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SLC26A4O43511 780 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 IDH1O75874 414 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 BBOX1O75936 387 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TM7SF2O76062 418 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 OXSR1O95747 527 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 FOSP01100 380 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CYP1A1P04798 512 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 KRT18P05783 430 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 RSPH10BP0C881 870 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CALM1P0DP23 149 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CALM2P0DP24 149 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CALM3P0DP25 149 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 RARBP10826 455 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PYGMP11217 842 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF23P17027 643 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GM2AP17900 193 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CD53P19397 219 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TAC1P20366 129 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MAOBP27338 520 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PRDX6P30041 224 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CA8P35219 290 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PGM1P36871 562 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GRIA4P48058 902 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 VPS41P49754 854 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TOB1P50616 345 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GALK1P51570 392 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 HADHBP55084 474 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 C21orf59P57076 290 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TFAP4Q01664 338 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PFKPQ01813 784 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CDC16Q13042 620 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 E2F2Q14209 437 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 WTAPQ15007 396 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SF3B3Q15393 1217 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ALX1Q15699 326 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 VPS72Q15906 364 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 NTRK3Q16288 839 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 NFE2Q16621 373 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MOGQ16653 247 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PTPN21Q16825 1174 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TKFCQ3LXA3 575 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SMUG1Q53HV7 270 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TDRD12Q587J7 1177 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ATAD3BQ5T9A4 648 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 OTUD7BQ6GQQ9 843 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TWF2Q6IBS0 349 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PPP4R4Q6NUP7 873 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 APOA5Q6Q788 366 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PAOXQ6QHF9 649 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 RRAGAQ7L523 313 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 DYMQ7RTS9 669 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 LRP10Q7Z4F1 713 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF804AQ7Z570 1209 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 DHDDSQ86SQ9 333 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SAPCD2Q86UD0 394 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CABP7Q86V35 215 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF410Q86VK4 478 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF354CQ86Y25 554 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 JAMLQ86YT9 394 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MMAAQ8IVH4 418 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 COLGALT2Q8IYK4 626 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF34Q8IZ26 560 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SCYL3Q8IZE3 742 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ABI1Q8IZP0 508 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GJD3Q8N144 294 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ESX1Q8N693 406 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 UBL4BQ8N7F7 174 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 C2CD4AQ8NCU7 369 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SMG8Q8ND04 991 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TTC8Q8TAM2 541 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 HM13Q8TCT9 377 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 C10orf82Q8WW14 230 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TRUB1Q8WWH5 349 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CDKL2Q92772 493 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 APBB2Q92870 758 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ART4Q93070 314 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 HES6Q96HZ4 224 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MS4A14Q96JA4 679 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CEP19Q96LK0 163 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 C7orf26Q96N11 449 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 YME1L1Q96TA2 773 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TTC1Q99614 292 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 NAP1L4Q99733 375 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 FERMT1Q9BQL6 677 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 AIFM2Q9BRQ8 373 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 GPATCH1Q9BRR8 931 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 PHF20Q9BVI0 1012 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CADM1Q9BY67 442 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC2Q9BYS8 371 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CCSER1Q9C0I3 900 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 RBM38Q9H0Z9 239 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms