RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 GABRDO14764 452 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 EIF3DO15371 548 aaKnown RBP eCLIP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 HUS1O60921 280 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 F11P03951 625 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 CYP2J2P51589 502 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 CRY1Q16526 586 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 DCP1BQ8IZD4 617 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 MAB21L3Q8N8X9 362 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 USP33Q8TEY7 942 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 HMGB4Q8WW32 186 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 MYLPFQ96A32 169 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 GCNAQ96QF7 691 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 PTPRQQ9UMZ3 2332 aa12.46□□□□□ -0.41
ARHGEF39-202ENST00000468876 PTPRDP23468 1912 aa12.46□□□□□ -0.42
ARHGEF39-202ENST00000468876 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.42
ARHGEF39-202ENST00000468876 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CLIC2O15247 247 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 NOL4O94818 638 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 FGF19O95750 216 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 DLATP10515 647 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 LMO2P25791 158 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 GJA4P35212 333 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 RBP5P82980 135 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CYP24A1Q07973 514 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CUL4BQ13620 913 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 SNRNP35Q16560 246 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CNNM4Q6P4Q7 775 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 UNC13DQ70J99 1090 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 LIMS2Q7Z4I7 341 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CMTM8Q8IZV2 173 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 TMEM86AQ8N2M4 240 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CPA6Q8N4T0 437 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 ZNF513Q8N8E2 541 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 RDH13Q8NBN7 331 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 PLEKHO2Q8TD55 490 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 RHBDD1Q8TEB9 315 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 ELMO3Q96BJ8 720 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 CDC6Q99741 560 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 C7orf25Q9BPX7 421 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 SYT15Q9BQS2 421 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 ACBD6Q9BR61 282 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 MRPL45Q9BRJ2 306 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 TMEM30AQ9NV96 361 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 TOR4AQ9NXH8 423 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 MMP17Q9ULZ9 603 aa12.45□□□□□ -0.42
ARHGEF39-202ENST00000468876 TNRC6BQ9UPQ9 1833 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 UBE4BO95155 1302 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 PCDH15Q96QU1 1955 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ZNF233A6NK53 670 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 AFMP43652 599 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ME1P48163 572 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 CASP4P49662 377 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 USP46P62068 366 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 MYL7Q01449 175 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 TAF12Q16514 161 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 NFE2Q16621 373 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 TMEM92Q6UXU6 159 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 WDR49Q8IV35 697 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 IQUBQ8NA54 791 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ZNF507Q8TCN5 953 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 CCDC127Q96BQ5 260 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 CGRRF1Q99675 332 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 DPEP3Q9H4B8 488 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 TRPC7Q9HCX4 862 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
ARHGEF39-202ENST00000468876 ANKRD17O75179 2603 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 HELZP42694 1942 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 C2orf78A6NCI8 922 aa12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 KLRC4O43908 158 aa12.43□□□□□ -0.42
ARHGEF39-202ENST00000468876 TNNC2P02585 160 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms