RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 NEK10Q6ZWH5 1172 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 R3HCC1LQ7Z5L2 792 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 SLC15A3Q8IY34 581 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ELOA2Q8IYF1 753 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 C11orf44Q8N8P7 122 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ATRIPQ8WXE1 791 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 NEIL1Q96FI4 390 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 BORCS6Q96GS4 357 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF668Q96K58 619 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 LRRC37BQ96QE4 947 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 PNKPQ96T60 521 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 REEP2Q9BRK0 252 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 TTPALQ9BTX7 342 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 LSM14BQ9BX40 385 aaKnown RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ABHD16BQ9H3Z7 469 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCDC134Q9H6E4 229 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRKRIP1Q9H875 184 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 RMI1Q9H9A7 625 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ETAA1Q9NY74 926 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM30AQ9NZY2 134 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 PI4KBQ9UBF8 816 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CNTN6Q9UQ52 1028 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 CNPY2Q9Y2B0 182 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 DNAJC16Q9Y2G8 782 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 ERCC6Q03468 1493 aa4.16□□□□□ -1.74
HMGB1P25-201ENST00000468402 PI4KAP2A4QPH2 592 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 C9orf118A6NHY6 69 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 B4DLN1 442 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 F5H697 171 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 AP3D1O14617 1153 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CD3EAPO15446 510 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SEPT4O43236 478 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 TRIM13O60858 407 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 TAF5LO75529 589 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 RPP40O75818 363 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 INHBBP09529 407 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 PI3P19957 117 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CR2P20023 1033 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 KCNA3P22001 575 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 RPS6KB1P23443 525 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CHMP24386 653 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 RAD52P43351 418 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 RNASE9P60153 205 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SLFN5Q08AF3 891 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SF3A3Q12874 501 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 TDGQ13569 410 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CCNIQ14094 377 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SMAD1Q15797 465 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CCDC96Q2M329 555 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 GALNTL6Q49A17 601 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM69AQ5T7M9 428 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM205BPQ63HN1 556 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ANKRD40Q6AI12 368 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 B4GALNT4Q76KP1 1039 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 DOK3Q7L591 496 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 KRT27Q7Z3Y8 459 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ANKS1BQ7Z6G8 1248 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SIAH1Q8IUQ4 282 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ARMC8Q8IUR7 673 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SP8Q8IXZ3 490 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CARFQ8N187 725 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 SYNE4Q8N205 404 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 FSIP1Q8NA03 581 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 FBXO15Q8NCQ5 510 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 KCNG4Q8TDN1 519 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ADAMTS17Q8TE56 1095 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 ST8SIA2Q92186 375 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CUL5Q93034 780 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 PTDSS2Q9BVG9 487 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 AGXT2Q9BYV1 514 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 TWSG1Q9GZX9 223 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CCDC68Q9H2F9 335 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CXorf36Q9H7Y0 433 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 AGO3Q9H9G7 860 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 GCM1Q9NP62 436 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 G6PC2Q9NQR9 355 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 EIF2B3Q9NR50 452 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 LIN7CQ9NUP9 197 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CNOT7Q9UIV1 285 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CNOT6Q9ULM6 557 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 NDRG4Q9ULP0 352 aaKnown RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 HSF4Q9ULV5 492 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 NFU1Q9UMS0 254 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CAMK2AQ9UQM7 478 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 CYP46A1Q9Y6A2 500 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 POLA1P09884 1462 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 LRRIQ1Q96JM4 1722 aa4.15□□□□□ -1.75
HMGB1P25-201ENST00000468402 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 AQRO60306 1485 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 VWA3AA6NCI4 1184 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 SYNDIG1LA6NDD5 238 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM90A18PA6NE21 464 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM90A16PA6NEW6 464 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 TCAF2A6NFQ2 919 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 MROH6A6NGR9 719 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM90A9PA6NNJ1 464 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 FAM90A5PA8MXJ8 464 aa4.14□□□□□ -1.75
HMGB1P25-201ENST00000468402 NPIPB6E9PJ23 425 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms