RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 DMAP1Q9NPF5 467 aaPredicted RBP6.26□□□□□ -1.41
USP39-213ENST00000467885 ST7Q9NRC1 585 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 KRT82Q9NSB4 513 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 PARVAQ9NVD7 372 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 LMCD1Q9NZU5 365 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 WDR35Q9P2L0 1181 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 MYO1AQ9UBC5 1043 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 CNOT8Q9UFF9 292 aaKnown RBP6.26□□□□□ -1.41
USP39-213ENST00000467885 PCDHB3Q9Y5E6 796 aa6.26□□□□□ -1.41
USP39-213ENST00000467885 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
USP39-213ENST00000467885 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 SLC38A8A6NNN8 435 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 YJEFN3A6XGL0 299 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 E7ENQ6 273 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ZMYND10O75800 440 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ZBED1O96006 694 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 F11P03951 625 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CALB1P05937 261 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ADH1AP07327 375 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 GLI1P08151 1106 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ZDHHC11BP0C7U3 371 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 EPCAMP16422 314 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ELF1P32519 619 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 GTF2F1P35269 517 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP39-213ENST00000467885 SCNN1AP37088 669 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SLC8A3P57103 927 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SNX16P57768 344 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 DAOAP59103 153 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 YWHAZP63104 245 aaKnown RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 RBM10P98175 930 aaKnown RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 OGDHQ02218 1023 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CREMQ03060 361 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ADAM15Q13444 863 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ADGRE1Q14246 886 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 DUSP6Q16828 381 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 MGAT5BQ3V5L5 792 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CCDC14Q49A88 953 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 EFHC1Q5JVL4 640 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SH3PXD2AQ5TCZ1 1133 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 LIN9Q5TKA1 542 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SNX30Q5VWJ9 437 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 PLPP4Q5VZY2 271 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 BSPRYQ5W0U4 402 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 OR6B2Q6IFH4 312 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 BLOC1S3Q6QNY0 202 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 OLFML1Q6UWY5 402 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 HFE2Q6ZVN8 426 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 FAM183BPQ6ZVS7 135 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 BEND5Q7L4P6 421 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SLC26A9Q7LBE3 791 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 BNIPLQ7Z465 357 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 KIAA1328Q86T90 577 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 TMEM150AQ86TG1 271 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 MON1AQ86VX9 555 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ZDHHC17Q8IUH5 632 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ZNF276Q8N554 614 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 LRRC57Q8N9N7 239 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 C3orf20Q8ND61 904 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 STKLD1Q8NE28 680 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 VN1R2Q8NFZ6 395 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 TPCN2Q8NHX9 752 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CTNNBL1Q8WYA6 563 aaPredicted RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 IRGQQ8WZA9 623 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CENPIQ92674 756 aaPredicted RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 NOX5Q96PH1 765 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 DDX23Q9BUQ8 820 aaKnown RBP6.25□□□□□ -1.41
USP39-213ENST00000467885 PRR14Q9BWN1 585 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ULBP1Q9BZM6 244 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 PLEKHA4Q9H4M7 779 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 TLE6Q9H808 572 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 LRRC4Q9HBW1 653 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 LZTFL1Q9NQ48 299 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CNGB3Q9NQW8 809 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ENTPD7Q9NQZ7 604 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 WDR70Q9NW82 654 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 OSER1Q9NX31 292 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 UVRAGQ9P2Y5 699 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 GUCA1BQ9UMX6 200 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 NAALADL1Q9UQQ1 740 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 SCML2Q9UQR0 700 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 CEP83Q9Y592 693 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ALG6Q9Y672 507 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 PTPRSQ13332 1948 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 ATP8B3O60423 1300 aa6.25□□□□□ -1.41
USP39-213ENST00000467885 PDCD11Q14690 1871 aaKnown RBP6.24□□□□□ -1.41
USP39-213ENST00000467885 ZNF840PA6NDX5 716 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 C2CD4BA6NLJ0 364 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 ESPNB1AK53 854 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 GOLGA8SH3BPF8 625 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 MYO1FO00160 1098 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 TRIM66O15016 1216 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 FANCGO15287 622 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 BUB1O43683 1085 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 KRT86O43790 486 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 ZNF500O60304 480 aaPredicted RBP6.24□□□□□ -1.41
USP39-213ENST00000467885 BUB1BO60566 1050 aaPredicted RBP6.24□□□□□ -1.41
USP39-213ENST00000467885 RFPL2O75678 378 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 GRAP2O75791 330 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 FBXO21O94952 628 aa6.24□□□□□ -1.41
USP39-213ENST00000467885 IPO7O95373 1038 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms