RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 REPS1Q96D71 796 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 IQCDQ96DY2 449 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 VN1R3Q9BXE9 311 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 GJB4Q9NTQ9 266 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 GEMIN8Q9NWZ8 242 aaKnown RBP5.04□□□□□ -1.6
SMC4-207ENST00000467263 LPAR3Q9UBY5 353 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 BTBD3Q9Y2F9 522 aa5.04□□□□□ -1.6
SMC4-207ENST00000467263 ZNF521Q96K83 1311 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 AQP7P3A6NL99 342 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 TISP43B9A030 160 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 CES2O00748 559 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 IKBKBO14920 756 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 THAP12O43422 761 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 KCNAB3O43448 404 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 PRC1O43663 620 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 CAND2O75155 1236 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 PMPCBO75439 489 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 JTBO76095 146 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 INMTO95050 263 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 A1BGP04217 495 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 PRKCBP05771 671 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 KRT18P05783 430 aaKnown RBP5.03□□□□□ -1.6
SMC4-207ENST00000467263 IGKV2-30P06310 120 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 DLDP09622 509 aaKnown RBP5.03□□□□□ -1.6
SMC4-207ENST00000467263 TSHRP16473 764 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 SFPQP23246 707 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMC4-207ENST00000467263 YY1P25490 414 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 EPHB2P29323 1055 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 GKP32189 559 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 STT3AP46977 705 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 GATMP50440 423 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 TBX4P57082 545 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 IFIT5Q13325 482 aaKnown RBP5.03□□□□□ -1.6
SMC4-207ENST00000467263 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 TBC1D25Q3MII6 688 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
SMC4-207ENST00000467263 SIRT6Q8N6T7 355 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 C11orf44Q8N8P7 122 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 CYP2W1Q8TAV3 490 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 PARD3BQ8TEW8 1205 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 WASF1Q92558 559 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 LRRC46Q96FV0 321 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 FCRL4Q96PJ5 515 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 FAM83DQ9H4H8 585 aa5.03□□□□□ -1.6
SMC4-207ENST00000467263 EXOC5O00471 708 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 EXOC3O60645 756 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 TJP3O95049 919 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 PHKG2P15735 406 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 TIRAPP58753 221 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
SMC4-207ENST00000467263 TIAL1Q01085 375 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC4-207ENST00000467263 HLTFQ14527 1009 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC4-207ENST00000467263 MANEALQ5VSG8 457 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 IL31Q6EBC2 164 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 METTL25Q8N6Q8 603 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 RPL36ALQ969Q0 106 aaKnown RBP5.02□□□□□ -1.61
SMC4-207ENST00000467263 AMFRQ9UKV5 643 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 HPSEQ9Y251 543 aa5.02□□□□□ -1.61
SMC4-207ENST00000467263 A0A087WZ62 844 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 TRIM38O00635 465 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 NBPF7P0C2Y1 421 aaPredicted RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 FGFR2P21802 821 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 HOXA4Q00056 320 aaPredicted RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 PSG6Q00889 435 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 LONRF1Q17RB8 773 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 SLC2A7Q6PXP3 512 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 KIRREL2Q6UWL6 708 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 CLEC9AQ6UXN8 241 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 TRIM72Q6ZMU5 477 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 NEK8Q86SG6 692 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 HIST1H2AAQ96QV6 131 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 THAP7Q9BT49 309 aaPredicted RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 CIPCQ9C0C6 399 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 HEYLQ9NQ87 328 aaPredicted RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 DNAJB11Q9UBS4 358 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 RGS17Q9UGC6 210 aaPredicted RBP5.01□□□□□ -1.61
SMC4-207ENST00000467263 RIMKLBQ9ULI2 386 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 CAPN11Q9UMQ6 739 aa5.01□□□□□ -1.61
SMC4-207ENST00000467263 APOL1O14791 398 aa5□□□□□ -1.61
SMC4-207ENST00000467263 SPRY2O43597 315 aa5□□□□□ -1.61
SMC4-207ENST00000467263 NCK2O43639 380 aa5□□□□□ -1.61
SMC4-207ENST00000467263 MOSPD3O75425 235 aa5□□□□□ -1.61
SMC4-207ENST00000467263 FGAP02671 866 aa5□□□□□ -1.61
SMC4-207ENST00000467263 MYL1P05976 194 aa5□□□□□ -1.61
SMC4-207ENST00000467263 CYP2D6P10635 497 aa5□□□□□ -1.61
SMC4-207ENST00000467263 CREB1P16220 341 aa5□□□□□ -1.61
SMC4-207ENST00000467263 ATICP31939 592 aa5□□□□□ -1.61
SMC4-207ENST00000467263 ALDH5A1P51649 535 aaPredicted RBP5□□□□□ -1.61
SMC4-207ENST00000467263 NEK3P51956 506 aa5□□□□□ -1.61
SMC4-207ENST00000467263 TUBA4AP68366 448 aa5□□□□□ -1.61
SMC4-207ENST00000467263 PRAMEF17Q5VTA0 474 aa5□□□□□ -1.61
SMC4-207ENST00000467263 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
SMC4-207ENST00000467263 CRTC1Q6UUV9 634 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms