RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 DUSP23Q9BVJ7 150 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 TLR8Q9NR97 1041 aaKnown RBP6.06□□□□□ -1.44
CXXC4-202ENST00000466963 THSD1Q9NS62 852 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 BMP2KQ9NSY1 1161 aaPredicted RBP6.06□□□□□ -1.44
CXXC4-202ENST00000466963 CLIC5Q9NZA1 410 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 TUBGCP4Q9UGJ1 667 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 NCOR2Q9Y618 2525 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 PLXNB3Q9ULL4 1909 aa6.06□□□□□ -1.44
CXXC4-202ENST00000466963 TBC1D3BA6NDS4 549 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 HNRNPDLO14979 420 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CAPN5O15484 640 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TCEA3O75764 348 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 AFPP02771 609 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 YWHAQP27348 245 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MATR3P43243 847 aaKnown RBP eCLIP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 C21orf59P57076 290 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 COG7P83436 770 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CAMK2GQ13555 558 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ECM1Q16610 540 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TMEM92Q6UXU6 159 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 DHX40Q8IX18 779 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ALLCQ8N6M5 410 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 FAM181AQ8N9Y4 354 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 C1orf216Q8TAB5 229 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GOLGA5Q8TBA6 731 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 KCTD13Q8WZ19 329 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GTF3C6Q969F1 213 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 FAM117AQ9C073 453 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GAREM1Q9H706 876 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CYLDQ9NQC7 956 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 OLFML3Q9NRN5 406 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ABI2Q9NYB9 513 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 AGO2Q9UKV8 859 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CSNK1G3Q9Y6M4 447 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MAP1BP46821 2468 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MYH11P35749 1972 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TRIP11Q15643 1979 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 LRRC72A6NJI9 287 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SGK1O00141 431 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ALOX15BO15296 676 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 EIF3DO15371 548 aaKnown RBP eCLIP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 IRAK2O43187 625 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TBCAO75347 108 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 FAM13AO94988 1023 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 PENKP01210 267 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CXCL8P10145 99 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GP1BBP13224 206 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CKMT2P17540 419 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 U2AF2P26368 475 aaKnown RBP eCLIP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 VARSP26640 1264 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 LONP1P36776 959 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ATG14Q6ZNE5 492 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 FILIP1Q7Z7B0 1213 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 WDR49Q8IV35 697 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ADGRF2Q8IZF7 708 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 RGL4Q8IZJ4 473 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 OR6C4Q8NGE1 309 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GLMNQ92990 594 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SYAP1Q96A49 352 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 PLD4Q96BZ4 506 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 LPIN3Q9BQK8 851 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 PYM1Q9BRP8 204 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MMTAG2Q9BU76 263 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 EPG5Q9HCE0 2579 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CACNA1GO43497 2377 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TSPAN3O60637 253 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 RNASEH1O60930 286 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ADAM23O75077 832 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 EDN1P05305 212 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SKOR1P84550 965 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SLC12A1Q13621 1099 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 HLA-BQ31612 363 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 C10orf76Q5T2E6 689 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 JADE1Q6IE81 842 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 RHBDF2Q6PJF5 856 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ANKS1BQ7Z6G8 1248 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SLCO6A1Q86UG4 719 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SLC41A1Q8IVJ1 513 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 DAW1Q8N136 415 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SETD7Q8WTS6 366 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 HMGB4Q8WW32 186 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 LRIG1Q96JA1 1093 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 SYT15Q9BQS2 421 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 ACE2Q9BYF1 805 aaPredicted RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CRISPLD1Q9H336 500 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 CUEDC2Q9H467 287 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 MAGEF1Q9HAY2 307 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 GOLGA2P5Q9HBQ8 144 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 DDX19AQ9NUU7 478 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 TOR4AQ9NXH8 423 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 DDX43Q9NXZ2 648 aaKnown RBP6.05□□□□□ -1.44
CXXC4-202ENST00000466963 KIAA1024Q9UPX6 916 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 PCDHGA7Q9Y5G6 932 aa6.05□□□□□ -1.44
CXXC4-202ENST00000466963 A0A1W2PQF6 199 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 I3L4J1 428 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 C1QL1O75973 258 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms