RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 NOS2P35228 1153 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 MATKP42679 507 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 PTPN9P43378 593 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 RWDD2BP57060 319 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 ATP11AP98196 1134 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 AMPD2Q01433 879 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 PLD1Q13393 1074 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 GPM6BQ13491 265 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 TAF12Q16514 161 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
VPS16-206ENST00000466415 DCAF6Q58WW2 860 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 PPP2R2DQ66LE6 453 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 CPNE8Q86YQ8 564 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 MNS1Q8NEH6 495 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 SCAMP5Q8TAC9 235 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 FBXO32Q969P5 355 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 CEP295NLQ96MC4 621 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 CFAP57Q96MR6 1250 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 NKX2-4Q9H2Z4 354 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 NGRNQ9NPE2 291 aaKnown RBP12.7□□□□□ -0.38
VPS16-206ENST00000466415 COMMD8Q9NX08 183 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 MAFFQ9ULX9 164 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 YBX2Q9Y2T7 364 aaKnown RBP12.7□□□□□ -0.38
VPS16-206ENST00000466415 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 USP3Q9Y6I4 520 aa12.7□□□□□ -0.38
VPS16-206ENST00000466415 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
VPS16-206ENST00000466415 SLC38A8A6NNN8 435 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 YJEFN3A6XGL0 299 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 E7ENQ6 273 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CES2O00748 559 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
VPS16-206ENST00000466415 PRPSAP2O60256 369 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CEP104O60308 925 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 SRGAP2O75044 1071 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 ABLIM3O94929 683 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 ARHGEF15O94989 841 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 KRT1P04264 644 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 KRT7P08729 469 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CNPP09543 421 aaKnown RBP12.69□□□□□ -0.38
VPS16-206ENST00000466415 NCAM1P13591 858 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 KLRC2P26717 231 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 YWHAQP27348 245 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CETN2P41208 172 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 PAFAH1B1P43034 410 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 ERVK-21P61565 698 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS16-206ENST00000466415 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 DAB2IPQ5VWQ8 1189 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 PM20D1Q6GTS8 502 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CEP112Q8N8E3 955 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 STKLD1Q8NE28 680 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 SPPL3Q8TCT6 385 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 KRT35Q92764 455 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CD101Q93033 1021 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 KLHL5Q96PQ7 755 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
VPS16-206ENST00000466415 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 CARD9Q9H257 536 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 DDX56Q9NY93 547 aaKnown RBP12.69□□□□□ -0.38
VPS16-206ENST00000466415 RRN3Q9NYV6 651 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
VPS16-206ENST00000466415 SCML2Q9UQR0 700 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
VPS16-206ENST00000466415 PLXNA4Q9HCM2 1894 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 LILRB3O75022 631 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 LRCH4O75427 683 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 SEC24AO95486 1093 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 GLUD1P00367 558 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 CSH1P0DML2 217 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 CSH2P0DML3 217 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 ATF6P18850 670 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 PCK1P35558 622 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 PBX2P40425 430 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 MARCKSL1P49006 195 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 TAS2R40P59535 323 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 ERVFC1P60507 584 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 TWF1Q12792 350 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 SLC25A52Q3SY17 297 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 LRRC38Q5VT99 294 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 BSPRYQ5W0U4 402 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 PDE12Q6L8Q7 609 aaKnown RBP12.68□□□□□ -0.38
VPS16-206ENST00000466415 TRNP1Q6NT89 227 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 CCDC149Q6ZUS6 474 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 HFE2Q6ZVN8 426 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 STRADAQ7RTN6 431 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 CCDC50Q8IVM0 306 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 RNF139Q8WU17 664 aa12.68□□□□□ -0.38
VPS16-206ENST00000466415 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms