RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 VGLL3A8MV65 326 aa19.08■□□□□ 0.64
COL9A3-205ENST00000466192 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.64
COL9A3-205ENST00000466192 TRMT10CQ7L0Y3 403 aaKnown RBP19.08■□□□□ 0.64
COL9A3-205ENST00000466192 ARCQ7LC44 396 aa19.08■□□□□ 0.64
COL9A3-205ENST00000466192 RTN4RL1Q86UN2 441 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-205ENST00000466192 RFX6Q8HWS3 928 aa19.08■□□□□ 0.64
COL9A3-205ENST00000466192 NDRG1Q92597 394 aaKnown RBP19.08■□□□□ 0.64
COL9A3-205ENST00000466192 SYT15Q9BQS2 421 aa19.08■□□□□ 0.64
COL9A3-205ENST00000466192 STARD7Q9NQZ5 370 aa19.08■□□□□ 0.64
COL9A3-205ENST00000466192 MYBPHLA2RUH7 354 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 ITGAVP06756 1048 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 GRK4P32298 578 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 PTPN9P43378 593 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 ADIGQ0VDE8 80 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 GRIK3Q13003 919 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 DPYSL3Q14195 570 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 CD300LGQ6UXG3 332 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 ARFGAP2Q8N6H7 521 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 BBOF1Q8ND07 529 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 EPS8L3Q8TE67 593 aaKnown RBP19.07■□□□□ 0.64
COL9A3-205ENST00000466192 MED10Q9BTT4 135 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 GPATCH2LQ9NWQ4 482 aa19.07■□□□□ 0.64
COL9A3-205ENST00000466192 A6NNZ2 444 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 SGK1O00141 431 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 FKTNO75072 461 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 B3GAT3O94766 335 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 SKIP12755 728 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 SLCO1A2P46721 670 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 SLC8A3P57103 927 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 HTRA3P83110 453 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 ADCY1Q08828 1119 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 TUBB8Q3ZCM7 444 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 BOLA3Q53S33 107 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 ZC3H12AQ5D1E8 599 aaKnown RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 CENPIQ92674 756 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 UBN1Q9NPG3 1134 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 KRT82Q9NSB4 513 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 ZNF638Q14966 1978 aaKnown RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 IFNB1P01574 187 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 PECAM1P16284 738 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 MDH1P40925 334 aaKnown RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 BRCC3P46736 316 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 ATXN1P54253 815 aaKnown RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 PPP2R2AP63151 447 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 GPS1Q13098 491 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 TUSC3Q13454 348 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 TTC13Q8NBP0 860 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 CCHCR1Q8TD31 782 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 PCED1BQ96HM7 432 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 RTP3Q9BQQ7 232 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 SNRNP25Q9BV90 132 aaKnown RBP19.06■□□□□ 0.64
COL9A3-205ENST00000466192 ADAM7Q9H2U9 754 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 C10orf88Q9H8K7 445 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 RGS18Q9NS28 235 aa19.06■□□□□ 0.64
COL9A3-205ENST00000466192 CAPN15O75808 1086 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 IVLP07476 585 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 IL4RP24394 825 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 LSP1P33241 339 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 NDUFV1P49821 464 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 RABGGTBP53611 331 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 MAP3K7CLP57077 242 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 KYNUQ16719 465 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 CA9Q16790 459 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 HIBCHQ6NVY1 386 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-205ENST00000466192 BCAS4Q8TDM0 211 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 TEKT4Q8WW24 435 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 KCTD13Q8WZ19 329 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 TLCD1Q96CP7 247 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 C9IYK1 514 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 APOC4-APOC2K7ER74 178 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 RGS16O15492 202 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-205ENST00000466192 APOC2P02655 101 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 FAM200BP0CF97 657 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 EFHC1Q5JVL4 640 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 FAM35AQ86V20 835 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 LINC01599Q8WXQ3 324 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 PGM2Q96G03 612 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 TBCBQ99426 244 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 FRMD8P1Q9BZ68 369 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-205ENST00000466192 TMEM30AQ9NV96 361 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL9A3-205ENST00000466192 SLC12A6Q9UHW9 1150 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 CDH9Q9ULB4 789 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 PTCH2Q9Y6C5 1203 aa19.05■□□□□ 0.64
COL9A3-205ENST00000466192 PTPRDP23468 1912 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 DNALI1O14645 258 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-205ENST00000466192 RASGRF2O14827 1237 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 TTC4O95801 387 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 ITGB1P05556 798 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 ODC1P11926 461 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 DESP17661 470 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 CACNA2D1P54289 1103 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 KRT81Q14533 505 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 PDK2Q15119 407 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 C6orf118Q5T5N4 469 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 MYCBPAPQ8TBZ2 947 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 RNF157Q96PX1 679 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 SMOQ99835 787 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 NCAPGQ9BPX3 1015 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms