RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 LSMEM2Q8N112 164 aa16.48■□□□□ 0.23
SNX12-203ENST00000465030 AIFM3Q96NN9 605 aa16.48■□□□□ 0.23
SNX12-203ENST00000465030 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
SNX12-203ENST00000465030 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
SNX12-203ENST00000465030 KCNJ14Q9UNX9 436 aa16.48■□□□□ 0.23
SNX12-203ENST00000465030 GFRA2O00451 464 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 PIRO00625 290 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 DEXIO95424 95 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 IGLV3-19P01714 112 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 MPOP05164 745 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 GRIK1P39086 918 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 PEX3P56589 373 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 INSM1Q01101 510 aaPredicted RBP16.47■□□□□ 0.23
SNX12-203ENST00000465030 TSPY1Q01534 308 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
SNX12-203ENST00000465030 FUT11Q495W5 492 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 HIST2H2BCQ6DN03 193 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 KDM7AQ6ZMT4 941 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 PYM1Q9BRP8 204 aaKnown RBP16.47■□□□□ 0.23
SNX12-203ENST00000465030 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 MKRN2Q9H000 416 aaKnown RBP16.47■□□□□ 0.23
SNX12-203ENST00000465030 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 PCED1AQ9H1Q7 454 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 PCDHB1Q9Y5F3 818 aa16.47■□□□□ 0.23
SNX12-203ENST00000465030 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 TRAK2O60296 914 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 OLFM2O95897 454 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.23
SNX12-203ENST00000465030 ITGB6P18564 788 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 TXKP42681 527 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 CCT2P78371 535 aaKnown RBP16.46■□□□□ 0.23
SNX12-203ENST00000465030 MCL1Q07820 350 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 ORC1Q13415 861 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 TSGA10IPQ3SY00 556 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 GRAMD4Q6IC98 578 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 XKR5Q6UX68 686 aa16.46■□□□□ 0.23
SNX12-203ENST00000465030 LIN37Q96GY3 246 aaPredicted RBP16.46■□□□□ 0.23
SNX12-203ENST00000465030 ICE1Q9Y2F5 2266 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 WASH3PC4AMC7 463 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 CPA1P15085 419 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 GABREP78334 506 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 STARD3Q14849 445 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 LINC00303Q3SY05 128 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 EARS2Q5JPH6 523 aaKnown RBP16.45■□□□□ 0.22
SNX12-203ENST00000465030 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
SNX12-203ENST00000465030 SCFD1Q8WVM8 642 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 OTUB2Q96DC9 234 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 TSPAN18Q96SJ8 248 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 TRPM5Q9NZQ8 1165 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
SNX12-203ENST00000465030 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.45■□□□□ 0.22
SNX12-203ENST00000465030 SETD2Q9BYW2 2564 aaPredicted RBP16.44■□□□□ 0.22
SNX12-203ENST00000465030 BLACEA4D250 179 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 PRRT4C9JH25 899 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 CLDN3O15551 220 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 ITGAVP06756 1048 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 KRT32Q14532 448 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 ANO4Q32M45 955 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 CCDC81Q6ZN84 652 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNX12-203ENST00000465030 EID2Q8N6I1 236 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 VCPIP1Q96JH7 1222 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 C6orf106Q9H6K1 298 aaPredicted RBP16.44■□□□□ 0.22
SNX12-203ENST00000465030 ASCL3Q9NQ33 180 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 KMT5AQ9NQR1 393 aa16.44■□□□□ 0.22
SNX12-203ENST00000465030 DNAJC17Q9NVM6 304 aaKnown RBP16.44■□□□□ 0.22
SNX12-203ENST00000465030 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
SNX12-203ENST00000465030 ZNF840PA6NDX5 716 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 MT-CO3P00414 261 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 ABCB4P21439 1286 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 PDIA5Q14554 519 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 ENOX2Q16206 610 aaKnown RBP16.43■□□□□ 0.22
SNX12-203ENST00000465030 ADAT2Q7Z6V5 191 aaKnown RBP16.43■□□□□ 0.22
SNX12-203ENST00000465030 SCN4BQ8IWT1 228 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 FAM26EQ8N5C1 309 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 SAP25Q8TEE9 199 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 SIPA1Q96FS4 1042 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 ELF4Q99607 663 aaPredicted RBP16.43■□□□□ 0.22
SNX12-203ENST00000465030 CCSER1Q9C0I3 900 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 SPHK2Q9NRA0 654 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 THSD1Q9NS62 852 aa16.43■□□□□ 0.22
SNX12-203ENST00000465030 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
SNX12-203ENST00000465030 CKMT2P17540 419 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 PDIA3P30101 505 aaKnown RBP16.42■□□□□ 0.22
SNX12-203ENST00000465030 LSSP48449 732 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 TAF6P49848 677 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 SHBQ15464 509 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 PRAMEF14Q5SWL7 426 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 JADE1Q6IE81 842 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 TMEM25Q86YD3 366 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 TMPRSS6Q8IU80 811 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 PRCCQ92733 491 aaPredicted RBP16.42■□□□□ 0.22
SNX12-203ENST00000465030 MMS19Q96T76 1030 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 PKMYT1Q99640 499 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 STON1Q9Y6Q2 735 aa16.42■□□□□ 0.22
SNX12-203ENST00000465030 NEMFO60524 1076 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms