RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SPATA31A6Q5VVP1 1343 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 A0A087WZ62 844 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 A8MVJ9 347 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 TARM1B6A8C7 271 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 RBL1P28749 1068 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 PTH2RP49190 550 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 PMS2P11Q13670 270 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 RRAGBQ5VZM2 374 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 PTCHD4Q6ZW05 846 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 NGDNQ8NEJ9 315 aaKnown RBP7.06□□□□□ -1.28
PTCD3-205ENST00000464541 LRRC46Q96FV0 321 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 ZBTB45Q96K62 511 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-205ENST00000464541 SLC25A32Q9H2D1 315 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 TMOD4Q9NZQ9 345 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 COL15A1P39059 1388 aa7.06□□□□□ -1.28
PTCD3-205ENST00000464541 H7C1Q1 480 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 EXOC5O00471 708 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 HNRNPDLO14979 420 aaKnown RBP7.05□□□□□ -1.28
PTCD3-205ENST00000464541 NCK2O43639 380 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 TMPRSS11DO60235 418 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 COQ9O75208 318 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 UBE4AQ14139 1066 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 FAXCQ5TGI0 409 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 FCRLBQ6BAA4 426 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 PTF1AQ7RTS3 328 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 SRLQ86TD4 932 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 TXLNBQ8N3L3 684 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 ACRBPQ8NEB7 543 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 CYP2W1Q8TAV3 490 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 CTHRC1Q96CG8 243 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 SGCZQ96LD1 299 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 GDF15Q99988 308 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 SNX15Q9NRS6 342 aa7.05□□□□□ -1.28
PTCD3-205ENST00000464541 CCNT2O60583 730 aaKnown RBP7.04□□□□□ -1.28
PTCD3-205ENST00000464541 FGAP02671 866 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 HARSP12081 509 aaKnown RBP7.04□□□□□ -1.28
PTCD3-205ENST00000464541 GABRB3P28472 473 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 ATICP31939 592 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 HOXA4Q00056 320 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-205ENST00000464541 SLC35G1Q2M3R5 365 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 USP49Q70CQ1 688 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 AMIGO2Q86SJ2 522 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 REPS1Q96D71 796 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 DAZAP1Q96EP5 407 aaKnown RBP7.04□□□□□ -1.28
PTCD3-205ENST00000464541 LENG8Q96PV6 779 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-205ENST00000464541 TM7SF3Q9NS93 570 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 MAN2B2Q9Y2E5 1009 aa7.04□□□□□ -1.28
PTCD3-205ENST00000464541 AGPSO00116 658 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 AP4M1O00189 453 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 CES2O00748 559 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 CREB1P16220 341 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 EEF1GP26641 437 aaKnown RBP7.03□□□□□ -1.28
PTCD3-205ENST00000464541 CYP4F2P78329 520 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 C4orf46Q504U0 113 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 L1TD1Q5T7N2 865 aaKnown RBP7.03□□□□□ -1.28
PTCD3-205ENST00000464541 CRTC1Q6UUV9 634 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 TRIM72Q6ZMU5 477 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 DPY19L3Q6ZPD9 716 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 KIAA0408Q6ZU52 694 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 HASPINQ8TF76 798 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 ABHD5Q8WTS1 349 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 ZNF566Q969W8 418 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 SNX18Q96RF0 628 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 NECTIN3Q9NQS3 549 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 TFCP2L1Q9NZI6 479 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 SLC27A6Q9Y2P4 619 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 CEP83Q9Y592 693 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 FER1L4A9Z1Z3 1794 aa7.03□□□□□ -1.28
PTCD3-205ENST00000464541 POLR2AP24928 1970 aaKnown RBP7.02□□□□□ -1.29
PTCD3-205ENST00000464541 COL11A2P13942 1736 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-205ENST00000464541 LRRC3CA6NJW4 275 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 SPRY2O43597 315 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 EGR1P18146 543 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 FBLP22087 321 aaKnown RBP7.02□□□□□ -1.29
PTCD3-205ENST00000464541 CD38P28907 300 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 HTR3AP46098 478 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
PTCD3-205ENST00000464541 SYCP2LQ5T4T6 812 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 SAMD3Q8N6K7 520 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 TERB1Q8NA31 727 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 ZNF764Q96H86 408 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-205ENST00000464541 WDYHV1Q96HA8 205 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 VPS50Q96JG6 964 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 CHST12Q9NRB3 414 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 PTGFRNQ9P2B2 879 aa7.02□□□□□ -1.29
PTCD3-205ENST00000464541 OR2W5A6NFC9 320 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 MST1P26927 711 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 NTSR1P30989 418 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 HTR7P34969 479 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 HSPA7P48741 367 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 EIF4A1P60842 406 aaKnown RBP7.01□□□□□ -1.29
PTCD3-205ENST00000464541 GPS1Q13098 491 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 MAPKAPK3Q16644 382 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 ARL6IP4Q66PJ3 421 aaKnown RBP7.01□□□□□ -1.29
PTCD3-205ENST00000464541 SYCE2Q6PIF2 218 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 KIRREL2Q6UWL6 708 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms