RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 NMUR1Q9HB89 426 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 CYLDQ9NQC7 956 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 ST7Q9NRC1 585 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 OSER1Q9NX31 292 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 WNT16Q9UBV4 365 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 FBXL21Q9UKT6 434 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 PIK3R2O00459 728 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 CHADO15335 359 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 GABBR2O75899 941 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 MBL2P11226 248 aaPredicted RBP15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 RALAP11233 206 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 RARGP13631 454 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 ACADSBP45954 432 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 RPL34P49207 117 aaKnown RBP15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 SCML4Q8N228 414 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 ZNF276Q8N554 614 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 SH3RF2Q8TEC5 729 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 NDRG1Q92597 394 aaKnown RBP15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 ASIC4Q96FT7 647 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 C1QTNF1Q9BXJ1 281 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 NACA2Q9H009 215 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 CLIC5Q9NZA1 410 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 CPQQ9Y646 472 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 TECTAO75443 2155 aa15.25■□□□□ 0.03
SQSTM1-205ENST00000464493 TMEM221A6NGB7 291 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 M0R296 226 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 LEFTY2O00292 366 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 GPR37L1O60883 481 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 FBXO21O94952 628 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TBX18O95935 607 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TCF3P15923 654 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 ATP5C1P36542 298 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 YWHAGP61981 247 aaKnown RBP eCLIP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 ZXDBP98169 803 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 ZNF77Q15935 545 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 KLHDC10Q6PID8 442 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TADA2BQ86TJ2 420 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TMEM110Q86TL2 294 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 NOP9Q86U38 636 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 PASD1Q8IV76 773 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 SCUBE3Q8IX30 993 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 WDTC1Q8N5D0 677 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TTC16Q8NEE8 873 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 RIN3Q8TB24 985 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 DDX1Q92499 740 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 CDK5RAP1Q96SZ6 601 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 SLC4A5Q9BY07 1137 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 IFNKQ9P0W0 207 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 CYTH4Q9UIA0 394 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 CA14Q9ULX7 337 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 CEP83Q9Y592 693 aa15.24■□□□□ 0.03
SQSTM1-205ENST00000464493 HELZP42694 1942 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 FAM86C2PA6NEL3 165 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 YJEFN3A6XGL0 299 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 E7ENQ6 273 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 DAOAP59103 153 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 PDCLQ13371 301 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 MTF1Q14872 753 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 SLC44A4Q53GD3 710 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 C10orf120Q5SQS8 335 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 TAF3Q5VWG9 929 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 BHLHA9Q7RTU4 235 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 DDX42Q86XP3 938 aaKnown RBP eCLIP15.23■□□□□ 0.032e-11■□□□□ 10.2
SQSTM1-205ENST00000464493 ZNF677Q86XU0 584 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 SIX5Q8N196 739 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 EPS8L1Q8TE68 723 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 IRGQQ8WZA9 623 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 DNASE1L2Q92874 299 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 ZFYVE19Q96K21 471 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 PPP1R13BQ96KQ4 1090 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 NOX5Q96PH1 765 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 MIS12Q9H081 205 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 C11orf16Q9NQ32 467 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 DNMT3LQ9UJW3 386 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 NUDT5Q9UKK9 219 aa15.23■□□□□ 0.03
SQSTM1-205ENST00000464493 KRBA1A5PL33 1030 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 E5RJQ4 531 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 ARNTLO00327 626 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 TPM3P06753 285 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 PBX1P40424 430 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 ARID5AQ03989 594 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 USP4Q13107 963 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 TMEM31Q5JXX7 168 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 IER5LQ5T953 404 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 BSPRYQ5W0U4 402 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms