RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 PGRMC1O00264 195 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 TRIM66O15016 1216 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 DAB1O75553 588 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 RNF8O76064 485 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 MYOGP15173 224 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 MATKP42679 507 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 PTPN9P43378 593 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 ATXN1P54253 815 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 SMTNL2Q2TAL5 461 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 DCAF6Q58WW2 860 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 KCNT1Q5JUK3 1230 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 LRRC38Q5VT99 294 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 FAM109BQ6ICB4 259 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 RSRC2Q7L4I2 434 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 KATNAL2Q8IYT4 538 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 SPPL2BQ8TCT7 592 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 SLC2A13Q96QE2 648 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 SEPT5Q99719 369 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 ZWILCHQ9H900 591 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 POPDC2Q9HBU9 364 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 NGRNQ9NPE2 291 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 TTC7AQ9ULT0 858 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 USP18Q9UMW8 372 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 MYO16Q9Y6X6 1858 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 PI4K2BG5E9Z4 385 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 ARHGEF15O94989 841 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 TRUB2O95900 331 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 URODP06132 367 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 GLI1P08151 1106 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 HAPLN1P10915 354 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 PCK1P35558 622 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 MAGEA10P43363 369 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 PGFP49763 221 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 TERF1P54274 439 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 HDAC4P56524 1084 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 USP46P62068 366 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 ERCC6LQ2NKX8 1250 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 MGAT5BQ3V5L5 792 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 OTUD1Q5VV17 481 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 CYP4V2Q6ZWL3 525 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 TBCBQ99426 244 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 HERPUD2Q9BSE4 406 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 AP1M1Q9BXS5 423 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
GYPC-205ENST00000464053 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
GYPC-205ENST00000464053 GREB1Q4ZG55 1949 aa16.14■□□□□ 0.18
GYPC-205ENST00000464053 TCRBV7S2A1N4TA0A589 114 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 LTFP02788 710 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 KRT17Q04695 432 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 SMARCB1Q12824 385 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 LONRF2Q1L5Z9 754 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 TEX35Q5T0J7 233 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 NUP93Q8N1F7 819 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 SCML4Q8N228 414 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 C2orf15Q8WU43 125 aaKnown RBP16.14■□□□□ 0.17
GYPC-205ENST00000464053 IRGQQ8WZA9 623 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 RAPGEF5Q92565 580 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 EDEM1Q92611 657 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 RNF25Q96BH1 459 aaPredicted RBP16.14■□□□□ 0.17
GYPC-205ENST00000464053 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
GYPC-205ENST00000464053 GBF1Q92538 1859 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 CEP290O15078 2479 aa16.14■□□□□ 0.17
GYPC-205ENST00000464053 ZNF638Q14966 1978 aaKnown RBP16.14■□□□□ 0.17
GYPC-205ENST00000464053 LINC01553A4QN01 128 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 LILRB3O75022 631 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 ABLIM3O94929 683 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 ZRANB2O95218 330 aaKnown RBP eCLIP16.13■□□□□ 0.17
GYPC-205ENST00000464053 SEC24AO95486 1093 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 KRT1P04264 644 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 NOS2P35228 1153 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 SULT1E1P49888 294 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 SHHQ15465 462 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 HADHQ16836 314 aaKnown RBP16.13■□□□□ 0.17
GYPC-205ENST00000464053 SLC25A52Q3SY17 297 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 SCYL2Q6P3W7 929 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 POLNQ7Z5Q5 900 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 ZDHHC14Q8IZN3 488 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 EXD1Q8NHP7 514 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 ZNF461Q8TAF7 563 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 NT5C3BQ969T7 300 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 NPY6RQ99463 290 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 ALG13Q9NP73 1137 aaKnown RBP16.13■□□□□ 0.17
GYPC-205ENST00000464053 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
GYPC-205ENST00000464053 PLXNA3P51805 1871 aa16.13■□□□□ 0.17
GYPC-205ENST00000464053 SART1O43290 800 aaKnown RBP16.12■□□□□ 0.17
GYPC-205ENST00000464053 RARAP10276 462 aa16.12■□□□□ 0.17
GYPC-205ENST00000464053 NCAM1P13591 858 aa16.12■□□□□ 0.17
GYPC-205ENST00000464053 ATF6P18850 670 aa16.12■□□□□ 0.17
GYPC-205ENST00000464053 BMPR1AP36894 532 aa16.12■□□□□ 0.17
GYPC-205ENST00000464053 ITIH3Q06033 890 aa16.12■□□□□ 0.17
GYPC-205ENST00000464053 MTMR3Q13615 1198 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms