RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 LARS2Q15031 903 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 RBMS2Q15434 407 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 NRACQ8N912 160 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 OR56A3Q8NH54 315 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 STAG1Q8WVM7 1258 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 MAML1Q92585 1016 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 TMEM60Q9H2L4 133 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 SACM1LQ9NTJ5 587 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 ZIM2Q9NZV7 527 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 USP19O94966 1318 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 TRIM43BA6NCK2 446 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 ISM1B1AKI9 464 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 H3BNC9 293 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 PYCARD-AS1I3L0S3 204 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 PEX14O75381 377 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 MYBP10242 640 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 KLRC1P26715 233 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 TIAL1Q01085 375 aaKnown RBP eCLIP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 C10orf25Q5T742 122 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 GORABQ5T7V8 394 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 VSTM1Q6UX27 236 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 DCDC5Q6ZRR9 648 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 MICU3Q86XE3 530 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 COL23A1Q86Y22 540 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 LIX1LQ8IVB5 337 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 C16orf71Q8IYS4 520 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 LINC01465Q8N7H1 131 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 SMCR8Q8TEV9 937 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 NSMCE1Q8WV22 266 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 MAP4K1Q92918 833 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 TRIM43Q96BQ3 446 aaPredicted RBP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 HS6ST2Q96MM7 605 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 MTMR4Q9NYA4 1195 aa5.03□□□□□ -1.6
ITGB1-208ENST00000464001 BCCIPQ9P287 314 aaKnown RBP eCLIP5.03□□□□□ -1.6
ITGB1-208ENST00000464001 CFAP69A5D8W1 941 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 FAM227AF5H4B4 570 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 H7C4K7 107 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 ADAM10O14672 748 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 SPRY2O43597 315 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 BRAFP15056 766 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CD19P15391 556 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 PTDSS1P48651 473 aaKnown RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 GATMP50440 423 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 ARHGEF7Q14155 803 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CCDC181Q5TID7 509 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CXorf57Q6NSI4 855 aaKnown RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 RANBP10Q6VN20 620 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 KCTD20Q7Z5Y7 419 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 KIAA0319LQ8IZA0 1049 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 ZBTB45Q96K62 511 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 SIGLEC11Q96RL6 698 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 STK31Q9BXU1 1019 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 C22orf23Q9BZE7 217 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 DHX36Q9H2U1 1008 aaKnown RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CHPF2Q9P2E5 772 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 CPNE7Q9UBL6 633 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-208ENST00000464001 HDAC9Q9UKV0 1011 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 TPCN1Q9ULQ1 816 aa5.02□□□□□ -1.61
ITGB1-208ENST00000464001 EXOC5O00471 708 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 FRS3O43559 492 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 RRP9O43818 475 aaKnown RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 PIAS2O75928 621 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 PRF1P14222 555 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 ZKSCAN1P17029 563 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 SCP2P22307 547 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 HOXD9P28356 352 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 PGDP52209 483 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 HTRA4P83105 476 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 ID2Q02363 134 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 CFHR3Q02985 330 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 ZNF91Q05481 1191 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 SLC29A2Q14542 456 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 ZNF750Q32MQ0 723 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 AWAT1Q58HT5 328 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 SAMD14Q8IZD0 417 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 RUNDC1Q96C34 613 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 EBF3Q9H4W6 596 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 C1orf112Q9NSG2 853 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 STK32BQ9NY57 414 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 AFF4Q9UHB7 1163 aaKnown RBP5.01□□□□□ -1.61
ITGB1-208ENST00000464001 L1RE1Q9UN81 338 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 ZMYM2Q9UBW7 1377 aa5.01□□□□□ -1.61
ITGB1-208ENST00000464001 HGFP14210 728 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 TKTP29401 623 aaKnown RBP5□□□□□ -1.61
ITGB1-208ENST00000464001 ITGA8P53708 1063 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 KCNB1Q14721 858 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 NPY5RQ15761 445 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 CNGA2Q16280 664 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms