RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 GAB4Q2WGN9 574 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 SGO2Q562F6 1265 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 HSP90AA4PQ58FG1 418 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 TMEM196Q5HYL7 178 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 FSTL4Q6MZW2 842 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 C1orf228Q6PIY5 440 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 UBA3Q8TBC4 463 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 PCDHB4Q9Y5E5 795 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 O00370 1275 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
XRN1-203ENST00000463916 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
XRN1-203ENST00000463916 GCNT1Q02742 428 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
XRN1-203ENST00000463916 PDE4CQ08493 712 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 RAB41Q5JT25 222 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 CPA6Q8N4T0 437 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 NDRG1Q92597 394 aaKnown RBP13.67□□□□□ -0.22
XRN1-203ENST00000463916 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
XRN1-203ENST00000463916 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 CYLDQ9NQC7 956 aa13.67□□□□□ -0.22
XRN1-203ENST00000463916 MDM4O15151 490 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 VDRP11473 427 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 SLC9A1P19634 815 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 PKDCCQ504Y2 493 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 PKN3Q6P5Z2 889 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
XRN1-203ENST00000463916 UBE2TQ9NPD8 197 aaPredicted RBP13.66□□□□□ -0.22
XRN1-203ENST00000463916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
XRN1-203ENST00000463916 ANTXRLA6NF34 631 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 GREM1O60565 184 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 GABBR2O75899 941 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 EGFP01133 1207 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 CYP17A1P05093 508 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 IRF1P10914 325 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 RARGP13631 454 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 ERCC5P28715 1186 aaPredicted RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 ZNF132P52740 706 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 SATB1Q01826 763 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 RBM43Q6ZSC3 357 aaKnown RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 KLF16Q9BXK1 252 aaPredicted RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 NACA2Q9H009 215 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 THAP9Q9H5L6 903 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 PRMT8Q9NR22 394 aaPredicted RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 NAGPAQ9UK23 515 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 FBXO4Q9UKT5 387 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 ATG2BQ96BY7 2078 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 MYOFQ9NZM1 2061 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 E2F8A0AVK6 867 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 PAEPP09466 180 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 TDGF1P13385 188 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 TKTL1P51854 596 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 BCAT1P54687 386 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 MESP2Q0VG99 397 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 LRRC32Q14392 662 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 LCLAT1Q6UWP7 414 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 BHLHA9Q7RTU4 235 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 BBS7Q8IWZ6 715 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
XRN1-203ENST00000463916 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
XRN1-203ENST00000463916 NFATC1O95644 943 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 ATP5C1P36542 298 aaKnown RBP13.64□□□□□ -0.23
XRN1-203ENST00000463916 OPRD1P41143 372 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 MTIF2P46199 727 aaKnown RBP13.64□□□□□ -0.23
XRN1-203ENST00000463916 BST2Q10589 180 aaKnown RBP13.64□□□□□ -0.23
XRN1-203ENST00000463916 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
XRN1-203ENST00000463916 DHCR24Q15392 516 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 PM20D1Q6GTS8 502 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
XRN1-203ENST00000463916 SPEM1Q8N4L4 309 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 KIAA1958Q8N8K9 716 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 NELL1Q92832 810 aa13.64□□□□□ -0.23
XRN1-203ENST00000463916 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
XRN1-203ENST00000463916 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.64□□□□□ -0.23
XRN1-203ENST00000463916 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
XRN1-203ENST00000463916 PON1P27169 355 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 PLA2G4AP47712 749 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 AMPD2Q01433 879 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 CNGA2Q16280 664 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 C10orf120Q5SQS8 335 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 PMF1Q6P1K2 205 aa13.63□□□□□ -0.23
XRN1-203ENST00000463916 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms